Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 6.4e-35 150.2 76 100.0
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 3.9e-32 141.0 76 93.4
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 6.4e-27 123.6 75 85.3
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 2.3e-24 115.2 76 81.6
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 5.0e-24 114.0 76 78.9
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-21 105.5 72 73.6
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.8e-21 105.5 72 73.6
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.2e-21 104.0 72 70.8
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 5.2e-21 104.0 72 72.2
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 3.7e-19 97.8 58 79.3
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 2.4e-18 95.1 72 68.1
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.6e-17 90.9 75 66.7
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 6.0e-17 90.5 65 69.2
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 7.8e-17 90.1 73 64.4
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 7.8e-17 90.1 72 62.5
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.0e-16 89.7 72 62.5
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.3e-16 89.4 75 65.3
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.7e-16 89.0 72 61.1
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.7e-16 89.0 72 61.1
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.3e-16 88.6 70 64.3
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 3.0e-16 88.2 71 62.0
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.0e-16 88.2 72 61.1
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 3.0e-16 88.2 78 65.4
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 3.9e-16 87.8 74 63.5
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 3.9e-16 87.8 74 58.1
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.1e-16 87.4 73 63.0
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 6.6e-16 87.0 73 64.4
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 6.6e-16 87.0 72 58.3
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 6.6e-16 87.0 78 61.5
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-15 86.3 80 66.2
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.1e-15 86.3 70 65.7
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.1e-15 86.3 72 59.7
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 1.5e-15 85.9 77 62.3
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 1.5e-15 85.9 78 60.3
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-15 85.5 80 66.2
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.9e-15 85.5 72 59.7
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.5e-15 85.1 70 62.9
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 2.5e-15 85.1 70 58.6
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-15 84.7 74 58.1
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 4.3e-15 84.3 74 58.1
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.6e-15 84.0 70 61.4
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.6e-15 84.0 72 61.1
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 5.6e-15 84.0 75 61.3
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 5.6e-15 84.0 74 56.8
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 5.6e-15 84.0 69 60.9
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.3e-15 83.6 80 65.0
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.5e-15 83.2 80 63.8
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 9.5e-15 83.2 67 59.7
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 1.2e-14 82.8 71 59.2
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-14 82.4 71 64.8
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-14 82.4 71 66.2
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.6e-14 82.4 70 57.1
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 2.1e-14 82.0 71 59.2
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 2.8e-14 81.6 63 60.3
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.6e-14 81.3 76 61.8
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.6e-14 81.3 76 61.8
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 3.6e-14 81.3 71 56.3
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 4.7e-14 80.9 65 60.0
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.2e-14 80.5 70 60.0
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 6.2e-14 80.5 66 62.1
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.1e-14 80.1 70 60.0
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 8.1e-14 80.1 72 58.3
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-13 79.3 69 55.1
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.8e-13 79.0 75 56.0
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-13 79.0 74 56.8
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-13 78.6 70 58.6
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 4.0e-13 77.8 76 50.0
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.8e-13 77.0 76 59.2
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.8e-13 77.0 74 55.4
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 6.8e-13 77.0 52 69.2
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.9e-13 76.6 72 59.7
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.9e-13 76.6 83 53.0
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.9e-13 76.6 72 55.6
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 8.9e-13 76.6 62 59.7
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.2e-12 76.3 75 49.3
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.4e-12 74.7 74 52.7
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 4.4e-12 74.3 75 48.0
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 7.6e-12 73.6 64 62.5
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.6e-12 73.6 72 55.6
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 9.9e-12 73.2 74 54.1
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 1.3e-11 72.8 78 55.1
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.7e-11 72.4 72 58.3
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-11 72.0 74 54.1
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 2.9e-11 71.6 80 55.0
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 2.9e-11 71.6 67 52.2
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 2.9e-11 71.6 63 54.0
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 3.8e-11 71.2 69 55.1
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 6.4e-11 70.5 71 54.9
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 8.4e-11 70.1 67 52.2
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-10 69.7 75 58.7
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-10 69.3 75 52.0
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 1.9e-10 68.9 86 50.0
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 1.9e-10 68.9 71 54.9
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 1.9e-10 68.9 75 45.3
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-10 68.6 64 59.4
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 2.4e-10 68.6 68 60.3
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 4.1e-10 67.8 72 54.2
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 5.4e-10 67.4 72 56.9
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 5.4e-10 67.4 67 55.2
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 5.4e-10 67.4 70 54.3
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 7.1e-10 67.0 71 52.1
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 7.1e-10 67.0 63 49.2
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 7.1e-10 67.0 74 52.7
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 9.2e-10 66.6 65 55.4
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-09 66.2 74 55.4
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.2e-09 66.2 84 45.2
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-09 65.5 69 59.4
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-09 65.1 71 53.5
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 2.7e-09 65.1 71 50.7
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 2.7e-09 65.1 71 50.7
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 3.5e-09 64.7 80 48.8
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.5e-09 64.7 51 58.8
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 4.6e-09 64.3 72 55.6
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 7.8e-09 63.5 75 45.3
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 7.8e-09 63.5 67 55.2
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.0e-08 63.2 68 52.9
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.3e-08 62.8 79 48.1
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 1.3e-08 62.8 72 51.4
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 1.7e-08 62.4 73 41.1
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-08 61.6 69 55.1
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 3.0e-08 61.6 82 51.2
Sed0000720 Sechium edule HOM05D006282 ORTHO05D007460 6.6e-08 60.5 80 47.5
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-07 58.5 68 51.5
Nn1g09674 Nelumbo nucifera HOM05D006282 ORTHO05D007460 7.3e-07 57.0 72 45.8
MELO3C027180.2 Cucumis melo HOM05D064062 ORTHO05D007460 2.1e-06 55.5 73 41.1
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.7e-06 54.3 77 49.4
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.7e-06 54.3 77 51.9
AUR62002340 Chenopodium quinoa HOM05D038336 ORTHO05D038978 4.7e-06 54.3 62 43.5


User provided reference genes

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