Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 0.0e+00 1311.2 687 100.0
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 8.3e-166 588.2 691 50.5
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 7.7e-164 581.6 679 50.4
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 3.2e-162 576.2 728 47.7
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 7.2e-154 548.5 649 49.5
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 3.2e-149 533.1 725 48.1
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 4.1e-149 532.7 691 46.9
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 1.2e-145 521.2 676 49.3
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 1.2e-145 521.2 692 47.1
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 5.2e-144 515.8 695 47.1
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 4.1e-141 506.1 699 46.5
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 2.5e-138 496.9 684 45.9
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 5.6e-138 495.7 688 45.9
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 3.1e-136 490.0 675 44.4
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 3.1e-136 490.0 695 44.6
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 8.9e-136 488.4 688 44.2
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 2.3e-128 463.8 704 42.3
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 2.0e-127 460.7 648 44.3
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 9.2e-125 451.8 686 42.1
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 8.6e-123 445.3 712 42.0
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 3.3e-122 443.4 688 41.7
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.3e-122 443.0 686 43.0
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 5.6e-122 442.6 702 41.9
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 8.1e-121 438.7 703 41.3
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.4e-120 438.0 711 41.9
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 4.0e-120 436.4 711 40.8
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 4.0e-120 436.4 706 40.8
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.2e-119 434.9 685 42.0
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 2.2e-118 430.6 685 41.8
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 7.1e-117 425.6 681 41.4
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 1.2e-116 424.9 701 39.7
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 3.5e-116 423.3 709 39.6
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 4.6e-116 422.9 715 41.4
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 3.9e-115 419.9 707 40.2
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 1.3e-113 414.8 704 38.5
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 2.8e-113 413.7 692 39.9
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 2.4e-112 410.6 712 42.8
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 1.5e-111 407.9 709 39.9
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 3.4e-111 406.8 738 39.8
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 4.4e-111 406.4 686 38.8
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 4.4e-111 406.4 716 39.2
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 9.9e-111 405.2 709 40.9
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 1.7e-110 404.4 700 39.3
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 1.4e-109 401.4 704 38.4
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 2.4e-109 400.6 689 39.2
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 5.4e-109 399.4 695 38.7
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 7.1e-109 399.1 663 42.4
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 4.6e-108 396.4 702 38.3
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 4.3e-106 389.8 707 40.6
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 7.4e-106 389.0 712 40.7
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 6.2e-105 386.0 686 38.5
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 6.2e-105 386.0 616 40.9
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.1e-104 385.2 663 40.1
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 1.1e-104 385.2 657 40.3
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 5.8e-103 379.4 703 36.8
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 9.9e-103 378.6 703 37.1
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 3.8e-102 376.7 708 40.8
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 3.8e-102 376.7 708 40.8
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 2.7e-100 370.5 695 36.4
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 1.0e-99 368.6 705 37.3
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.5e-98 364.8 409 52.1
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 1.5e-98 364.8 723 37.8
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 2.5e-98 364.0 694 37.0
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 5.6e-98 362.8 729 36.1
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 2.8e-97 360.5 596 40.8
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 6.2e-97 359.4 711 36.6
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 6.9e-96 355.9 513 44.2
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 9.0e-96 355.5 727 35.2
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 5.5e-93 346.3 600 39.0
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 2.8e-89 334.0 735 35.4
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 6.9e-88 329.3 735 35.2
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 1.0e-86 325.5 624 37.7
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 2.5e-85 320.9 681 34.7
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 5.5e-85 319.7 680 34.7
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 1.0e-83 315.5 724 34.9
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 3.9e-83 313.5 672 35.6
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 5.1e-83 313.2 733 33.6
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.6e-81 308.1 753 33.7
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 6.9e-80 302.8 681 34.7
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 3.4e-79 300.4 648 35.0
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 5.0e-78 296.6 725 33.2
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 5.0e-78 296.6 699 35.3
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 1.4e-77 295.0 648 35.0
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 2.5e-77 294.3 565 39.8
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 5.5e-77 293.1 565 39.8
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 2.7e-76 290.8 632 36.4
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 1.8e-75 288.1 629 34.0
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 2.2e-73 281.2 648 34.4
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 2.2e-73 281.2 420 41.4
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 1.0e-70 272.3 285 55.1
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 3.8e-70 270.4 694 33.1
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 5.2e-67 260.0 561 35.8
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 6.7e-67 259.6 669 33.2
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 4.4e-66 256.9 589 35.8
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 8.0e-60 236.1 437 35.0
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.8e-57 226.9 341 42.8
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 2.9e-54 217.6 292 46.2
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 2.9e-54 217.6 691 28.9
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 5.5e-53 213.4 540 33.1
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 1.6e-52 211.8 326 42.0
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 4.7e-52 210.3 426 37.3
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 2.0e-50 204.9 695 27.9
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.1e-36 158.3 338 37.0
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 9.8e-34 149.4 425 30.8
Zm00001eb184290 Zea mays HOM05D006730 ORTHO05D008189 5.6e-29 133.7 695 23.0
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 7.3e-29 133.3 400 26.5
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 1.6e-28 132.1 418 28.7
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 6.2e-28 130.2 386 30.3
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 4.4e-26 124.0 283 31.4
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 6.2e-20 103.6 329 29.2
Ah.10g027090 Amaranthus hybridus HOM05D006730 ORTHO05D008189 1.3e-14 85.9 168 36.3
SEGI_29361 Sequoiadendron giganteum HOM05D006730 ORTHO05D008189 7.3e-13 80.1 336 27.1
HanXRQChr12g0385981 Helianthus annuus HOM05D006730 ORTHO05D008189 8.1e-12 76.6 91 48.4
Dinv05092 Davidia involucrata HOM05D006730 ORTHO05D008189 6.8e-11 73.6 57 66.7
Actinidia26680 Actinidia chinensis HOM05D006730 ORTHO05D008189 2.6e-10 71.6 177 32.2
Gohir.A02G010550 Gossypium hirsutum HOM05D006730 ORTHO05D008189 2.9e-09 68.2 86 41.9


User provided reference genes

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