Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 1.5e-33 145.6 75 100.0
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 1.6e-30 135.6 75 96.0
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 1.1e-26 122.9 75 85.3
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 1.3e-24 115.9 75 81.3
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 6.7e-21 103.6 75 74.7
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.2e-19 98.6 72 70.8
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.2e-19 98.6 72 70.8
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 6.3e-19 97.1 72 68.1
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 5.3e-18 94.0 72 66.7
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 2.6e-17 91.7 58 77.6
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 3.5e-17 91.3 72 68.1
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-16 88.2 75 66.7
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 5.0e-16 87.4 72 56.9
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.9e-15 85.5 72 55.6
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.2e-15 84.3 73 61.6
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 5.5e-15 84.0 73 61.6
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 7.2e-15 83.6 72 59.7
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 9.4e-15 83.2 75 62.7
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 9.4e-15 83.2 72 59.7
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 9.4e-15 83.2 72 58.3
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 9.4e-15 83.2 70 60.0
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 9.4e-15 83.2 78 61.5
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-14 82.8 76 63.2
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-14 82.8 80 63.8
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-14 82.8 76 63.2
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.2e-14 82.8 72 59.7
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-14 82.4 72 61.1
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 1.6e-14 82.4 78 61.5
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-14 82.0 70 61.4
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.1e-14 82.0 80 63.8
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 2.1e-14 82.0 70 58.6
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-14 81.6 70 61.4
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 2.7e-14 81.6 72 58.3
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 2.7e-14 81.6 78 59.0
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-14 81.6 69 60.9
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 3.6e-14 81.3 73 60.3
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.0e-14 80.1 70 60.0
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.0e-14 80.1 80 62.5
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 8.0e-14 80.1 75 61.3
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 8.0e-14 80.1 77 59.7
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-13 79.7 80 61.2
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.4e-13 79.3 72 55.6
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-13 79.3 74 58.1
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 1.4e-13 79.3 63 65.1
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-13 79.0 72 61.1
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.8e-13 79.0 76 60.5
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 1.8e-13 79.0 71 54.9
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-13 79.0 70 62.9
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.8e-13 79.0 70 58.6
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 1.8e-13 79.0 64 57.8
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-13 79.0 74 55.4
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-13 79.0 74 55.4
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 2.3e-13 78.6 74 55.4
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 4.0e-13 77.8 74 58.1
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.2e-13 77.4 70 58.6
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-12 76.3 75 58.7
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 1.2e-12 76.3 67 58.2
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-12 75.9 71 60.6
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-12 75.9 71 62.0
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-12 75.9 72 58.3
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-12 75.5 66 59.1
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.6e-12 75.1 70 58.6
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 2.6e-12 75.1 74 54.1
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 3.4e-12 74.7 71 53.5
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 3.4e-12 74.7 65 56.9
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.4e-12 74.3 72 56.9
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 5.7e-12 73.9 71 53.5
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 5.7e-12 73.9 75 49.3
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.5e-12 73.6 75 60.0
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 9.7e-12 73.2 71 53.5
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-11 72.8 69 55.1
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-11 72.0 74 56.8
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 2.8e-11 71.6 75 48.0
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-11 71.6 74 55.4
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.7e-11 71.2 74 56.8
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.7e-11 71.2 82 51.2
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.3e-11 70.5 72 56.9
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 6.3e-11 70.5 75 46.7
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 8.3e-11 70.1 74 54.1
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-10 68.6 74 56.8
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-10 68.2 74 52.7
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-10 68.2 69 55.1
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 7.0e-10 67.0 74 51.4
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 7.0e-10 67.0 70 47.1
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 7.0e-10 67.0 62 54.8
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.1e-10 66.6 71 54.9
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 9.1e-10 66.6 77 53.2
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 9.1e-10 66.6 71 54.9
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-09 65.5 63 58.7
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 2.7e-09 65.1 70 48.6
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-09 65.1 71 54.9
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 4.5e-09 64.3 67 46.3
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 4.5e-09 64.3 75 44.0
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 5.9e-09 63.9 64 57.8
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 5.9e-09 63.9 68 57.4
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.0e-08 63.2 78 42.3
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.3e-08 62.8 72 54.2
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 1.7e-08 62.4 73 45.2
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 2.2e-08 62.0 75 44.0
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 2.2e-08 62.0 72 51.4
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 2.2e-08 62.0 74 51.4
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 2.9e-08 61.6 66 51.5
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 3.8e-08 61.2 87 49.4
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 3.8e-08 61.2 72 50.0
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 3.8e-08 61.2 71 49.3
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 3.8e-08 61.2 71 49.3
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.0e-08 60.8 69 56.5
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.1e-07 59.7 68 48.5
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 1.1e-07 59.7 69 53.6
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 1.5e-07 59.3 72 47.2
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.5e-07 59.3 81 50.6
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 1.9e-07 58.9 81 51.9
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.5e-07 58.5 67 56.7
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-07 58.5 50 56.0
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 2.5e-07 58.5 79 51.9
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 2.5e-07 58.5 69 47.8
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-07 58.2 72 52.8
Cfa015233 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-07 57.8 77 53.2
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-06 56.2 77 54.5
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.2e-06 56.2 67 47.8
Sed0000720 Sechium edule HOM05D006282 ORTHO05D007460 1.6e-06 55.8 74 45.9
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-06 55.1 68 50.0
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-06 55.1 72 51.4


User provided reference genes

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