Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 7.8e-104 380.6 206 100.0
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 9.3e-73 277.3 206 74.3
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 5.7e-54 214.9 208 61.1
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 7.0e-52 208.0 207 57.0
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 1.0e-50 204.1 207 56.5
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 2.4e-44 183.0 205 51.7
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 2.7e-43 179.5 198 54.0
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 3.5e-43 179.1 198 54.5
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 3.8e-42 175.6 204 52.0
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 3.6e-40 169.1 204 51.0
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 4.7e-40 168.7 205 48.8
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 1.0e-39 167.5 203 48.8
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 1.8e-39 166.8 206 51.0
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 3.0e-39 166.0 205 47.3
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 1.3e-37 160.6 204 50.5
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 2.8e-37 159.5 199 49.7
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 2.8e-37 159.5 186 50.5
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 3.7e-37 159.1 201 51.2
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 4.8e-37 158.7 127 64.6
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 4.8e-37 158.7 127 64.6
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 2.4e-36 156.4 204 51.5
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 5.4e-36 155.2 181 50.8
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 3.5e-35 152.5 181 49.7
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 5.9e-35 151.8 199 48.7
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 7.7e-35 151.4 181 51.4
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 1.3e-34 150.6 183 51.4
MD02G1218900 Malus domestica HOM05D007972 ORTHO05D010352 1.5e-33 147.1 183 47.5
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 1.9e-33 146.7 179 46.9
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 2.5e-33 146.4 163 49.7
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 1.6e-32 143.7 179 45.8
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 2.8e-32 142.9 203 44.3
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 2.8e-32 142.9 176 46.0
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 3.6e-32 142.5 177 46.9
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 3.6e-32 142.5 205 46.3
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 6.1e-32 141.7 166 47.0
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 1.8e-31 140.2 136 57.4
Nn1g00786 Nelumbo nucifera HOM05D007972 ORTHO05D010352 2.3e-31 139.8 203 45.8
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 3.0e-31 139.4 179 49.2
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 3.0e-31 139.4 137 56.9
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 8.9e-31 137.9 176 46.6
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 2.8e-29 132.9 168 50.0
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 8.3e-29 131.3 179 43.0
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 1.1e-28 131.0 173 46.2
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 4.1e-28 129.0 180 44.4
AUR62041847 Chenopodium quinoa HOM05D007972 ORTHO05D010352 4.5e-27 125.6 133 51.9
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 6.6e-26 121.7 170 44.1
Eucgr.E01542 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.6e-24 117.1 198 40.4
Eucgr.E01544 Eucalyptus grandis HOM05D007972 ORTHO05D010352 2.1e-24 116.7 198 41.4
CAN.G1585.7 Capsicum annuum HOM05D007972 ORTHO05D010352 3.6e-24 115.9 180 42.8
PGSC0003DMG401031172 Solanum tuberosum HOM05D007972 ORTHO05D010352 1.8e-23 113.6 179 40.2
Solyc01g089880.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 3.0e-23 112.8 174 42.0
PGSC0003DMG400031171 Solanum tuberosum HOM05D007972 ORTHO05D010352 3.0e-23 112.8 179 41.9
Sopen01g035720 Solanum pennellii HOM05D007972 ORTHO05D010352 4.0e-23 112.5 174 42.0
Sopen01g035730 Solanum pennellii HOM05D007972 ORTHO05D010352 9.8e-22 107.8 130 46.2
QL04p029065 Quercus lobata HOM05D007972 ORTHO05D010352 7.8e-19 98.2 143 45.5
Eucgr.E01539 Eucalyptus grandis HOM05D007972 ORTHO05D010352 2.5e-17 93.2 191 37.2
Phvul.008G048532 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 9.5e-17 91.3 107 46.7
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 4.7e-16 89.0 201 36.3
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 1.8e-15 87.0 186 37.1
EL10Ac2g02566 Beta vulgaris HOM05D007972 ORTHO05D010352 6.0e-11 72.0 77 46.8
Lsat_1_v5_gn_5_133620 Lactuca sativa HOM05D000490 ORTHO05D000785 1.3e-10 70.9 173 33.5
Nn1g00784 Nelumbo nucifera HOM05D044854 ORTHO05D010352 1.7e-10 70.5 151 35.1
ClCG07G000640 Citrullus lanatus HOM05D000490 ORTHO05D000785 7.3e-09 65.1 135 35.6
CsaV3_2G013680 Cucumis sativus L. HOM05D000490 ORTHO05D000785 1.6e-08 63.9 135 35.6
Sed0011012 Sechium edule HOM05D000490 ORTHO05D000785 2.8e-08 63.2 135 37.0
Phvul.008G048466 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 4.7e-08 62.4 46 63.0
Cfa006408 Carpinus fangiana HOM05D000490 ORTHO05D000785 6.2e-08 62.0 148 39.2
MELO3C014307.2 Cucumis melo HOM05D000490 ORTHO05D000785 8.1e-08 61.6 135 35.6
Eucgr.E01540 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.4e-07 60.8 115 39.1
Sopen09g027770 Solanum pennellii HOM05D000490 ORTHO05D000785 1.4e-07 60.8 135 33.3
Nn6g33778 Nelumbo nucifera HOM05D044854 ORTHO05D010352 1.8e-07 60.5 161 34.2
MD10G1191700 Malus domestica HOM05D000490 ORTHO05D000785 2.3e-07 60.1 160 35.0
CiPaw.03G258500 Carya illinoinensis HOM05D000490 ORTHO05D000785 3.1e-07 59.7 167 34.1
MD05G1204600 Malus domestica HOM05D000490 ORTHO05D000785 3.1e-07 59.7 176 34.1
Sc09g0003980 Simmondsia chinensis HOM05D000490 ORTHO05D000785 4.0e-07 59.3 147 34.7
CiPaw.01G226100 Carya illinoinensis HOM05D000490 ORTHO05D000785 1.2e-06 57.8 158 37.3
Lsat_1_v5_gn_1_36301 Lactuca sativa HOM05D000490 ORTHO05D000785 1.2e-06 57.8 134 37.3
Manes.11G122400 Manihot esculenta HOM05D007972 ORTHO05D249992 1.5e-06 57.4 118 42.4
Duzib235G1330 Durio zibethinus HOM05D000490 ORTHO05D000785 2.0e-06 57.0 137 36.5
QL12p042822 Quercus lobata HOM05D000490 ORTHO05D000785 2.0e-06 57.0 165 33.3
PSO832G2301 Papaver somniferum HOM05D000490 ORTHO05D000785 2.6e-06 56.6 126 35.7
Manes.01G201100 Manihot esculenta HOM05D000490 ORTHO05D000785 3.4e-06 56.2 180 32.8
Solyc09g066000.1 Solanum lycopersicum HOM05D000490 ORTHO05D000785 3.4e-06 56.2 135 31.9
Haze_04371 Corylus avellana HOM05D000490 ORTHO05D000785 4.4e-06 55.8 160 35.6
Manes.11G027700 Manihot esculenta HOM05D000490 ORTHO05D000785 4.4e-06 55.8 147 34.7
PGSC0003DMG400015078 Solanum tuberosum HOM05D000490 ORTHO05D000785 4.4e-06 55.8 135 31.9
arahy.Tifrunner.gnm1.ann1.V46WJU Arachis hypogaea HOM05D000490 ORTHO05D000785 5.8e-06 55.5 177 33.9
RcHm_v2.0_Chr6g0289341 Rosa chinensis HOM05D000490 ORTHO05D000785 5.8e-06 55.5 148 35.8
CSS0014374 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 7.5e-06 55.1 136 36.8
CSS0028104 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 7.5e-06 55.1 136 36.8
CSS0032635 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 9.9e-06 54.7 143 36.4
CSS0037929 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 9.9e-06 54.7 143 36.4
Gohir.D09G224700 Gossypium hirsutum HOM05D000490 ORTHO05D000785 9.9e-06 54.7 148 35.1
QL03p027247 Quercus lobata HOM05D000490 ORTHO05D000785 9.9e-06 54.7 135 36.3


User provided reference genes

Program Settings