Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 5.9e-124 447.6 234 100.0
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 1.1e-98 363.6 203 91.1
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.5e-98 363.2 203 89.7
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 2.8e-97 359.0 203 89.2
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 4.7e-97 358.2 220 83.6
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 8.1e-97 357.5 203 88.7
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.4e-96 356.7 203 89.7
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.3e-96 355.9 203 88.7
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 4.0e-96 355.1 203 88.2
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 6.8e-96 354.4 202 89.6
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 6.8e-96 354.4 203 88.7
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 2.6e-95 352.4 203 87.2
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 2.6e-95 352.4 203 84.7
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 2.6e-95 352.4 203 87.7
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 4.4e-95 351.7 213 85.0
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 9.9e-95 350.5 213 83.1
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.3e-94 350.1 203 89.7
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 1.3e-94 350.1 203 88.2
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.7e-94 349.7 213 83.1
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 2.9e-94 349.0 203 86.2
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 8.4e-94 347.4 203 84.7
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.1e-93 347.1 213 82.6
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.4e-93 346.7 203 83.3
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.4e-93 346.7 203 83.3
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.4e-93 346.7 203 85.7
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.9e-93 346.3 203 85.2
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.4e-93 345.9 203 84.7
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 5.4e-93 344.7 203 83.3
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 7.1e-93 344.4 203 83.7
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 9.2e-93 344.0 203 83.7
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.2e-92 343.6 202 85.6
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.6e-92 343.2 203 85.7
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 2.1e-92 342.8 203 83.3
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.7e-92 342.4 203 85.2
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 4.6e-92 341.7 203 83.3
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 4.6e-92 341.7 210 81.0
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 4.6e-92 341.7 204 82.4
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 7.8e-92 340.9 203 83.7
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 7.8e-92 340.9 203 82.8
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 7.8e-92 340.9 210 80.5
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 7.8e-92 340.9 210 80.5
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.0e-91 340.5 204 83.3
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.3e-91 339.3 203 83.7
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 2.3e-91 339.3 203 81.8
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 3.0e-91 339.0 203 83.7
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 3.0e-91 339.0 203 84.7
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 3.0e-91 339.0 203 86.2
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.9e-91 338.6 203 82.8
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 3.9e-91 338.6 203 83.3
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 3.9e-91 338.6 203 83.3
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 3.9e-91 338.6 203 83.3
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 5.1e-91 338.2 203 81.8
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 6.6e-91 337.8 210 80.5
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 8.6e-91 337.4 203 83.3
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 3.3e-90 335.5 203 82.8
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 3.3e-90 335.5 210 79.0
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 4.3e-90 335.1 207 82.6
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 5.6e-90 334.7 203 82.3
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 7.3e-90 334.3 203 81.8
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.2e-89 333.6 203 80.8
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.1e-89 332.8 203 81.8
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 6.2e-89 331.3 203 80.3
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 8.1e-89 330.9 184 91.3
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.1e-88 330.5 203 82.3
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.1e-88 330.5 203 80.3
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.4e-88 330.1 215 79.5
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 3.1e-88 328.9 203 82.3
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 8.9e-88 327.4 200 83.0
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 3.4e-87 325.5 200 82.0
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 3.4e-87 325.5 210 80.0
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.3e-86 323.6 201 79.1
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.3e-86 323.6 203 77.3
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.9e-86 322.4 203 79.3
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 4.9e-86 321.6 205 82.0
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 4.9e-86 321.6 203 81.8
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 3.2e-85 318.9 201 76.6
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 2.1e-84 316.2 224 72.8
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 7.8e-84 314.3 203 79.3
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 7.8e-84 314.3 203 76.8
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.7e-83 313.2 203 81.8
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 5.1e-83 311.6 203 75.9
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 8.7e-83 310.8 203 73.4
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 8.1e-81 304.3 201 75.1
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.1e-80 302.4 203 73.9
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.0e-80 302.0 203 73.9
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 9.0e-80 300.8 203 76.4
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.2e-79 300.4 203 73.9
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 6.4e-78 294.7 200 70.5
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 3.2e-77 292.4 203 74.4
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 2.1e-76 289.7 203 72.4
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.6e-73 280.0 203 66.5
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 4.9e-70 268.5 203 70.0
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.3e-67 259.6 156 78.8
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 2.8e-65 252.7 203 66.5
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 4.0e-64 248.8 152 77.6
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 2.5e-61 239.6 202 67.3
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 2.1e-60 236.5 208 59.1
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 2.3e-59 233.0 199 57.8
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.3e-57 227.3 203 63.1
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 1.4e-56 223.8 216 63.0
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 5.3e-56 221.9 202 60.4
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.1e-53 214.2 232 51.7
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.0e-51 207.6 203 52.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 1.9e-50 203.4 165 65.5
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 3.3e-50 202.6 156 67.3
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 9.7e-50 201.1 156 66.7
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.6e-49 200.3 203 49.8
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 3.4e-47 192.6 128 73.4
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 4.5e-47 192.2 117 82.9
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 5.0e-46 188.7 121 80.2
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.8e-43 180.3 114 78.1
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 2.1e-36 156.8 113 69.9
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 6.7e-35 151.8 119 63.9
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 3.7e-33 146.0 92 79.3
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.0e-30 137.9 85 80.0
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 5.2e-27 125.6 190 42.1
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.3e-17 94.4 127 52.0
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.7e-17 94.0 71 66.2
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.5e-13 80.9 51 78.4
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 9.2e-08 61.6 38 84.2


User provided reference genes

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