Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 1.5e-36 155.6 77 100.0
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 5.1e-24 114.0 64 82.8
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 7.4e-15 83.6 59 64.4
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.3e-14 82.8 49 73.5
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 3.7e-14 81.3 56 67.9
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 3.7e-14 81.3 56 67.9
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 3.7e-14 81.3 69 58.0
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 6.3e-14 80.5 59 62.7
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.4e-13 79.3 49 65.3
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.4e-13 79.3 56 64.3
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 1.8e-13 79.0 57 57.9
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 2.4e-13 78.6 56 62.5
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 2.4e-13 78.6 56 71.4
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 2.4e-13 78.6 49 61.2
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 3.1e-13 78.2 56 62.5
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 4.1e-13 77.8 56 62.5
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 5.3e-13 77.4 57 56.1
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 5.3e-13 77.4 49 69.4
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 6.9e-13 77.0 56 60.7
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 6.9e-13 77.0 57 52.6
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 9.1e-13 76.6 57 59.6
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 9.1e-13 76.6 56 60.7
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 9.1e-13 76.6 66 57.6
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.2e-12 76.3 77 46.8
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 2.0e-12 75.5 49 63.3
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 2.0e-12 75.5 57 52.6
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 2.6e-12 75.1 59 55.9
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 2.6e-12 75.1 49 61.2
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 2.6e-12 75.1 49 59.2
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 3.4e-12 74.7 56 57.1
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 4.5e-12 74.3 59 55.9
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 4.5e-12 74.3 77 40.3
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 4.5e-12 74.3 77 40.3
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 5.9e-12 73.9 59 55.9
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 7.7e-12 73.6 57 52.6
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 7.7e-12 73.6 57 59.6
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 1.0e-11 73.2 64 51.6
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.0e-11 73.2 49 55.1
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 1.0e-11 73.2 69 60.9
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.3e-11 72.8 49 53.1
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.3e-11 72.8 49 61.2
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 1.3e-11 72.8 57 56.1
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 2.2e-11 72.0 57 57.9
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.9e-11 71.6 77 40.3
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 2.9e-11 71.6 55 58.2
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 3.8e-11 71.2 59 54.2
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 3.8e-11 71.2 59 52.5
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 3.8e-11 71.2 59 52.5
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 6.5e-11 70.5 59 54.2
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 8.5e-11 70.1 59 55.9
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 8.5e-11 70.1 59 55.9
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 8.5e-11 70.1 59 55.9
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 8.5e-11 70.1 56 58.9
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 8.5e-11 70.1 64 51.6
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 8.5e-11 70.1 73 43.8
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.4e-10 69.3 47 66.0
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.9e-10 68.9 52 59.6
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.9e-10 68.9 55 56.4
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.9e-10 68.9 56 55.4
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 1.9e-10 68.9 65 50.8
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 2.5e-10 68.6 53 56.6
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 2.5e-10 68.6 53 56.6
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 2.5e-10 68.6 53 56.6
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 2.5e-10 68.6 53 56.6
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 3.2e-10 68.2 56 58.9
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 3.2e-10 68.2 43 74.4
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 4.2e-10 67.8 53 54.7
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 4.2e-10 67.8 55 49.1
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 4.2e-10 67.8 56 57.1
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 4.2e-10 67.8 56 57.1
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 5.5e-10 67.4 56 55.4
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 5.5e-10 67.4 59 50.8
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 5.5e-10 67.4 59 50.8
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 7.2e-10 67.0 59 55.9
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 7.2e-10 67.0 56 53.6
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.2e-09 66.2 59 50.8
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 1.6e-09 65.9 59 55.9
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 1.6e-09 65.9 75 48.0
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 2.1e-09 65.5 56 55.4
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.1e-09 65.5 75 48.0
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 2.7e-09 65.1 55 56.4
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 3.6e-09 64.7 53 52.8
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 3.6e-09 64.7 59 54.2
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 3.6e-09 64.7 61 49.2
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.6e-09 64.7 59 50.8
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 4.6e-09 64.3 59 55.9
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 6.1e-09 63.9 66 50.0
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.0e-08 63.2 59 52.5
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 1.0e-08 63.2 59 52.5
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 1.8e-08 62.4 49 55.1
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 2.3e-08 62.0 57 47.4
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 5.1e-08 60.8 49 53.1
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 5.1e-08 60.8 58 50.0
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 6.7e-08 60.5 54 48.1
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 8.8e-08 60.1 57 45.6
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 8.8e-08 60.1 49 51.0
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 8.8e-08 60.1 53 50.9
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 8.8e-08 60.1 59 50.8
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 2.6e-07 58.5 49 49.0
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.3e-07 58.2 49 49.0
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 3.3e-07 58.2 51 52.9
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 9.7e-07 56.6 48 52.1
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 8.2e-06 53.5 47 44.7


User provided reference genes

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