Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 4.4e-172 607.8 297 100.0
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 1.7e-131 473.0 297 76.1
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 2.3e-128 462.6 276 77.2
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 8.6e-128 460.7 276 78.6
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 2.5e-127 459.1 276 77.2
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 3.3e-127 458.8 286 76.9
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 7.3e-127 457.6 276 77.5
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.6e-126 456.4 284 76.1
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.0e-126 454.1 286 75.5
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 2.3e-125 452.6 280 76.1
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 3.4e-124 448.7 269 78.4
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 7.5e-124 447.6 286 74.5
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 2.2e-123 446.0 282 74.8
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 1.1e-122 443.7 296 71.3
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 1.4e-122 443.4 260 80.0
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 1.9e-122 443.0 273 75.5
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 5.4e-122 441.4 282 74.1
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 2.7e-121 439.1 259 78.4
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 3.5e-121 438.7 248 81.5
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 4.6e-121 438.3 268 75.0
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.6e-118 429.9 266 74.1
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 8.9e-117 424.1 276 70.3
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.0e-116 422.9 270 70.7
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 2.0e-116 422.9 270 70.7
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 3.4e-116 422.2 285 68.8
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 7.5e-116 421.0 270 70.7
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 3.2e-114 415.6 246 76.4
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.4e-114 414.8 270 69.6
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.7e-113 412.5 360 58.9
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 3.5e-113 412.1 277 67.9
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 3.0e-112 409.1 244 77.0
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 2.5e-111 406.0 240 77.5
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 8.1e-110 401.0 253 69.6
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.1e-109 400.6 283 67.5
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 6.8e-109 397.9 300 62.7
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 6.4e-107 391.3 265 68.3
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.1e-105 386.3 274 66.4
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 3.0e-104 382.5 241 71.8
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 6.6e-104 381.3 275 64.4
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.6e-103 378.3 270 63.3
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 6.4e-99 364.8 211 80.6
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 1.9e-98 363.2 218 74.3
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.6e-97 360.1 315 57.1
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 6.2e-94 348.2 249 68.3
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.2e-92 344.0 258 60.9
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.6e-89 333.6 252 62.3
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.0e-88 330.9 212 71.2
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 1.8e-88 330.1 260 61.9
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 3.3e-87 325.9 206 71.8
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 2.1e-86 323.2 258 60.5
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 8.1e-86 321.2 247 61.9
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.2e-84 317.4 290 56.9
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.2e-84 317.4 267 55.1
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.1e-79 300.8 234 62.4
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 7.4e-79 298.1 193 68.4
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 6.9e-77 291.6 247 57.5
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.6e-76 289.7 264 51.1
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 2.2e-75 286.6 188 69.7
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 8.4e-75 284.6 260 56.2
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.8e-72 276.9 213 63.4
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 3.7e-70 269.2 203 64.5
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.2e-68 264.2 257 51.4
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.0e-67 261.2 257 50.6
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 2.9e-67 259.6 273 49.5
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 5.0e-67 258.8 257 50.2
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 6.5e-67 258.5 168 69.6
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 3.0e-64 249.6 257 49.4
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.9e-64 249.2 250 49.2
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.1e-63 247.7 251 48.6
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 4.8e-62 242.3 154 68.8
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 9.7e-55 218.0 228 50.0
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 6.5e-51 205.3 129 68.2
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.6e-49 200.7 261 37.5
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.6e-49 200.7 261 37.5
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 2.1e-49 200.3 279 34.8
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.1e-49 200.3 261 37.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 2.2e-43 180.3 136 61.8
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 1.5e-39 167.5 97 81.4
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 4.4e-39 166.0 104 76.0
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 9.1e-37 158.3 93 72.0
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 7.7e-36 155.2 97 75.3
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 7.7e-36 155.2 97 75.3
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 3.0e-32 143.3 99 69.7
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 1.0e-27 128.3 74 78.4
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 3.8e-27 126.3 103 59.2
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 3.7e-22 109.8 117 47.0
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.6e-20 104.4 66 80.3
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.6e-09 67.8 44 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2524 Anthoceros agrestis HOM05D007819 ORTHO05D009848 4.0e-08 63.2 49 53.1


User provided reference genes

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