Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 8.4e-221 770.0 378 100.0
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 1.2e-206 723.0 378 94.4
Manes.11G148800 Manihot esculenta HOM05D008179 ORTHO05D009362 7.2e-79 298.5 364 48.1
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 2.5e-39 167.2 360 35.0
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 4.3e-39 166.4 329 36.8
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 8.9e-37 158.7 359 31.5
TAR624G0619 Trochodendron aralioides HOM05D008179 ORTHO05D009362 3.7e-35 153.3 352 31.8
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 4.1e-34 149.8 337 30.6
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 6.0e-33 146.0 337 31.5
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 1.1e-31 141.7 348 31.9
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 5.6e-31 139.4 345 30.7
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 7.3e-31 139.0 325 31.1
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 3.6e-30 136.7 367 30.0
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 8.1e-30 135.6 357 28.6
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 4.0e-29 133.3 365 29.9
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 7.5e-28 129.0 284 33.5
Oeu062972.1 Olea europaea HOM05D008179 ORTHO05D009362 2.9e-27 127.1 346 29.5
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 1.4e-26 124.8 350 28.9
FAN14G5443 Fragaria x ananassa HOM05D008179 ORTHO05D009362 4.1e-26 123.2 402 28.6
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.4e-26 122.9 343 31.5
RcHm_v2.0_Chr3g0478691 Rosa chinensis HOM05D008179 ORTHO05D009362 7.1e-26 122.5 358 27.7
Prupe.4G220100 Prunus persica HOM05D008179 ORTHO05D009362 9.2e-26 122.1 365 28.5
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 1.2e-25 121.7 357 30.0
RcHm_v2.0_Chr3g0479021 Rosa chinensis HOM05D008179 ORTHO05D009362 2.3e-24 117.5 281 33.1
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 1.1e-23 115.2 332 28.9
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 1.6e-22 111.3 319 30.4
RcHm_v2.0_Chr5g0004511 Rosa chinensis HOM05D008179 ORTHO05D009362 1.6e-22 111.3 346 30.3
MD05G1336000 Malus domestica HOM05D008179 ORTHO05D009362 3.6e-22 110.2 348 26.4
FAN14G0841 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.2e-22 109.4 284 30.3
MD05G1336100 Malus domestica HOM05D008179 ORTHO05D009362 1.1e-21 108.6 363 25.9
Prupe.4G219800 Prunus persica HOM05D008179 ORTHO05D009362 1.1e-21 108.6 354 27.7
FvH4_6g21740 Fragaria vesca HOM05D008179 ORTHO05D009362 4.0e-21 106.7 284 29.9
MD10G1311600 Malus domestica HOM05D008179 ORTHO05D009362 1.2e-20 105.1 353 25.5
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 1.7e-19 101.3 384 26.3
Dinv17850 Davidia involucrata HOM05D008179 ORTHO05D009362 4.1e-18 96.7 346 27.5
FAN05G4853 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.4e-18 96.3 272 31.6
RcHm_v2.0_Chr5g0019881 Rosa chinensis HOM05D008179 ORTHO05D009362 1.2e-17 95.1 323 26.6
FAN02G3878 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.7e-17 94.0 276 30.4
SGA_v2.0_scaffold7G03894 Striga asiatica HOM05D008179 ORTHO05D009362 2.7e-17 94.0 342 25.7
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 4.6e-17 93.2 198 34.3
CAN.G958.3 Capsicum annuum HOM05D009034 ORTHO05D009362 8.1e-14 82.4 332 25.9
FvH4_2g03910 Fragaria vesca HOM05D008179 ORTHO05D009362 1.1e-13 82.0 212 29.2
FAN25G2419 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.9e-13 79.3 288 28.5
TAR624G0935 Trochodendron aralioides HOM05D008179 ORTHO05D009362 9.0e-13 79.0 107 39.3
CAN.G696.2 Capsicum annuum HOM05D009034 ORTHO05D009362 1.5e-12 78.2 291 25.1
Nitab4.5_0011228g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.5e-12 78.2 298 28.5
DCAR_008112 Daucus carota HOM05D008179 ORTHO05D009362 5.8e-12 76.3 226 29.2
PGSC0003DMG400044507 Solanum tuberosum HOM05D009034 ORTHO05D009362 5.8e-12 76.3 306 26.8
Nitab4.5_0009524g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 7.6e-12 75.9 276 30.1
Nitab4.5_0003526g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.7e-11 74.7 333 24.9
Sopen01g051920 Solanum pennellii HOM05D009034 ORTHO05D009362 1.7e-11 74.7 288 29.9
DCAR_028233 Daucus carota HOM05D008179 ORTHO05D009362 3.8e-11 73.6 264 26.9
Nitab4.5_0006159g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.2e-10 70.1 288 25.0
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.2e-10 70.1 262 29.0
Peaxi162Scf00016g00054 Petunia axillaris HOM05D009034 ORTHO05D009362 5.4e-10 69.7 295 28.1
SalBow6G4060 Salvia bowleyana HOM05D008179 ORTHO05D009362 5.4e-10 69.7 344 24.1
Sopen01g052330 Solanum pennellii HOM05D009034 ORTHO05D009362 5.4e-10 69.7 347 25.6
Nitab4.5_0010389g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.6e-09 68.2 182 32.4
PGSC0003DMG400036424 Solanum tuberosum HOM05D009034 ORTHO05D009362 2.7e-09 67.4 298 24.2
FvH4_6g24450 Fragaria vesca HOM05D008179 ORTHO05D009362 3.5e-09 67.0 382 23.3
FAN27G1228 Fragaria x ananassa HOM05D008179 ORTHO05D009362 4.6e-09 66.6 117 37.6
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 4.6e-09 66.6 309 26.9
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 4.6e-09 66.6 196 27.6
FAN22G0489 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.7e-08 64.7 222 27.9
Nn1g09439 Nelumbo nucifera HOM05D006664 ORTHO05D008819 1.7e-08 64.7 348 23.3
Peaxi162Scf00016g00626 Petunia axillaris HOM05D009034 ORTHO05D009362 3.9e-08 63.5 349 24.6
FAN16G0437 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.1e-08 63.2 133 33.1
Lj1A671T54 Lonicera japonica HOM05D000007 ORTHO05D000039 5.1e-08 63.2 264 24.6
Lj1C663T1 Lonicera japonica HOM05D000007 ORTHO05D000039 5.1e-08 63.2 319 24.1
COL.COLO4_34989 Corchorus olitorius HOM05D000007 ORTHO05D000521 6.6e-08 62.8 349 23.5
Lj1A662G33 Lonicera japonica HOM05D000007 ORTHO05D000039 6.6e-08 62.8 287 27.2
Nitab4.5_0000308g0340 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.6e-08 62.8 149 32.9
Lj1A671T53 Lonicera japonica HOM05D000007 ORTHO05D000039 8.7e-08 62.4 231 25.5
Lj1C671T7 Lonicera japonica HOM05D000007 ORTHO05D000039 8.7e-08 62.4 247 24.7
Solyc01g109730.1 Solanum lycopersicum HOM05D009034 ORTHO05D009362 1.5e-07 61.6 188 30.3
FAN20G2427 Fragaria x ananassa HOM05D008179 ORTHO05D009362 3.3e-07 60.5 103 33.0
Prupe.3G110400 Prunus persica HOM05D000007 ORTHO05D000039 1.3e-06 58.5 304 22.7
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-06 58.2 279 23.7
Atru.chr5.2396 Acer truncatum HOM05D000007 ORTHO05D000039 2.1e-06 57.8 350 20.9
AT3G10240 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.1e-06 57.8 314 22.9
Prupe.3G110600 Prunus persica HOM05D000007 ORTHO05D000039 2.8e-06 57.4 252 24.6
A03p50240 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-06 57.0 231 25.1
FvH4_5g11823 Fragaria vesca HOM05D000007 ORTHO05D000039 4.8e-06 56.6 306 23.2
Peaxi162Scf00324g00823 Petunia axillaris HOM05D013374 ORTHO05D013933 6.2e-06 56.2 373 23.9


User provided reference genes

Program Settings