Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G015900 Manihot esculenta HOM05D007861 ORTHO05D007271 3.1e-50 201.4 98 100.0
Manes.11G150200 Manihot esculenta HOM05D007861 ORTHO05D007271 7.7e-25 117.1 104 64.4
Atru.chr3.3557 Acer truncatum HOM05D007861 ORTHO05D007271 9.4e-15 83.6 102 47.1
Potri.009G008300 Populus trichocarpa HOM05D007861 ORTHO05D007271 1.6e-14 82.8 95 53.7
Ciclev10029681m.g Citrus clementina HOM05D007861 ORTHO05D007271 1.0e-13 80.1 91 49.5
Gohir.A05G106400 Gossypium hirsutum HOM05D007861 ORTHO05D007271 6.8e-13 77.4 93 51.6
arahy.Tifrunner.gnm1.ann1.ALS1H8 Arachis hypogaea HOM05D007861 ORTHO05D007271 8.8e-13 77.0 90 48.9
Prupe.6G107700 Prunus persica HOM05D007861 ORTHO05D007271 1.2e-12 76.6 71 60.6
Sabra09G0004800 Salix brachista HOM05D007861 ORTHO05D007271 1.5e-12 76.3 86 51.2
FAN16G3504 Fragaria x ananassa HOM05D007861 ORTHO05D007271 3.4e-12 75.1 106 45.3
Gohir.D05G106401 Gossypium hirsutum HOM05D007861 ORTHO05D007271 3.4e-12 75.1 93 50.5
Gorai.009G110500 Gossypium raimondii HOM05D007861 ORTHO05D007271 3.4e-12 75.1 93 50.5
FvH4_3g31180 Fragaria vesca HOM05D007861 ORTHO05D007271 4.4e-12 74.7 106 45.3
FAN11G3777 Fragaria x ananassa HOM05D007861 ORTHO05D007271 4.4e-12 74.7 106 45.3
FAN25G1997 Fragaria x ananassa HOM05D007861 ORTHO05D007271 4.4e-12 74.7 106 45.3
RcHm_v2.0_Chr5g0057831 Rosa chinensis HOM05D007861 ORTHO05D007271 4.4e-12 74.7 106 45.3
Cfa010349 Carpinus fangiana HOM05D007861 ORTHO05D007271 5.7e-12 74.3 66 57.6
Haze_23757 Corylus avellana HOM05D007861 ORTHO05D007271 7.5e-12 73.9 70 52.9
MELO3C026916.2 Cucumis melo HOM05D007861 ORTHO05D007271 1.3e-11 73.2 102 50.0
Lalb_Chr24g0394821 Lupinus albus HOM05D007861 ORTHO05D007271 1.3e-11 73.2 86 51.2
FAN21G2212 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.7e-11 72.8 106 45.3
Potri.004G213900 Populus trichocarpa HOM05D007861 ORTHO05D007271 1.7e-11 72.8 94 50.0
Sabra04G0145100 Salix brachista HOM05D007861 ORTHO05D007271 2.8e-11 72.0 63 57.1
Thecc.09G347700 Theobroma cacao HOM05D007861 ORTHO05D007271 3.7e-11 71.6 85 52.9
CiPaw.13G118000 Carya illinoinensis HOM05D007861 ORTHO05D007271 1.1e-10 70.1 95 45.3
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 1.1e-10 70.1 103 47.6
Cpa.g.sc65.32 Carica papaya HOM05D007861 ORTHO05D007271 1.4e-10 69.7 101 48.5
Lj3g0021425 Lotus japonicus HOM05D007861 ORTHO05D007271 2.4e-10 68.9 101 49.5
CsaV3_6G014180 Cucumis sativus L. HOM05D007861 ORTHO05D007271 5.4e-10 67.8 89 52.8
Sed0017526 Sechium edule HOM05D007861 ORTHO05D007271 5.4e-10 67.8 88 46.6
MSTRG.21100 Avicennia marina HOM05D007861 ORTHO05D007271 7.0e-10 67.4 78 50.0
Glyma.12G177000 Glycine max HOM05D007861 ORTHO05D007271 7.0e-10 67.4 87 51.7
Medtr2g095310 Medicago truncatula HOM05D007861 ORTHO05D007271 9.1e-10 67.0 87 52.9
TPR.G11489 Trifolium pratense HOM05D007861 ORTHO05D007271 9.1e-10 67.0 87 51.7
ClCG02G021400 Citrullus lanatus HOM05D007861 ORTHO05D007271 1.2e-09 66.6 71 49.3
Lalb_Chr14g0374511 Lupinus albus HOM05D007861 ORTHO05D007271 1.2e-09 66.6 91 46.2
Medtr4g057830 Medicago truncatula HOM05D007861 ORTHO05D007271 2.0e-09 65.9 65 49.2
Phvul.005G132100 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 2.0e-09 65.9 87 50.6
CiPaw.14G086500 Carya illinoinensis HOM05D007861 ORTHO05D007271 4.5e-09 64.7 92 45.7
Migut.N02575 Erythranthe guttata HOM05D007861 ORTHO05D007271 4.5e-09 64.7 62 53.2
Lj3g0027314 Lotus japonicus HOM05D007861 ORTHO05D007271 5.9e-09 64.3 95 43.2
Lalb_Chr01g0004491 Lupinus albus HOM05D007861 ORTHO05D007271 5.9e-09 64.3 91 46.2
Aqoxy1G01166 Aquilegia oxysepala HOM05D007861 ORTHO05D007271 7.7e-09 63.9 80 43.8
COL.COLO4_34705 Corchorus olitorius HOM05D007861 ORTHO05D007271 7.7e-09 63.9 80 47.5
Lalb_Chr03g0027611 Lupinus albus HOM05D007861 ORTHO05D007271 1.0e-08 63.5 89 43.8
Migut.D02257 Erythranthe guttata HOM05D007861 ORTHO05D007271 1.3e-08 63.2 83 42.2
Phvul.011G083700 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 1.7e-08 62.8 90 43.3
Glyma.13G323700 Glycine max HOM05D007861 ORTHO05D007271 2.2e-08 62.4 86 50.0
TPR.G10289 Trifolium pratense HOM05D007861 ORTHO05D007271 2.2e-08 62.4 93 45.2
VMungo1127G1395 Vigna mungo HOM05D007861 ORTHO05D007271 2.2e-08 62.4 90 45.6
TPR.G6167 Trifolium pratense HOM05D007861 ORTHO05D007271 2.9e-08 62.0 96 40.6
Gohir.D08G217100 Gossypium hirsutum HOM05D007861 ORTHO05D007271 3.8e-08 61.6 96 44.8
Glyma.12G079100 Glycine max HOM05D007861 ORTHO05D007271 5.0e-08 61.2 92 45.7
Gohir.A08G200000 Gossypium hirsutum HOM05D007861 ORTHO05D007271 5.0e-08 61.2 91 45.1
Sed0005749 Sechium edule HOM05D007861 ORTHO05D007271 5.0e-08 61.2 84 45.2
Lsat_1_v5_gn_8_20640 Lactuca sativa HOM05D007861 ORTHO05D007271 6.5e-08 60.8 62 45.2
Phvul.007G098200 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 8.5e-08 60.5 65 44.6
ECA233G4124 Erigeron canadensis HOM05D007861 ORTHO05D007271 1.1e-07 60.1 58 55.2
Gorai.004G230800 Gossypium raimondii HOM05D007861 ORTHO05D007271 1.1e-07 60.1 90 45.6
Glyma.11G195000 Glycine max HOM05D007861 ORTHO05D007271 2.5e-07 58.9 89 41.6
Glyma.20G182100 Glycine max HOM05D007861 ORTHO05D007271 3.2e-07 58.5 66 43.9
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 4.2e-07 58.2 58 48.3
Migut.F01962 Erythranthe guttata HOM05D007861 ORTHO05D007271 5.5e-07 57.8 57 50.9
Psat6g181720 Pisum sativum HOM05D007861 ORTHO05D007271 5.5e-07 57.8 76 44.7
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 7.2e-07 57.4 87 43.7
Sp4g10850 Schrenkiella parvula HOM05D014739 ORTHO05D007271 7.2e-07 57.4 66 54.5
Solyc11g069730.1 Solanum lycopersicum HOM05D007861 ORTHO05D007271 7.2e-07 57.4 83 41.0
Medtr1g094250 Medicago truncatula HOM05D007861 ORTHO05D007271 9.4e-07 57.0 72 43.1
Glyma.10G208600 Glycine max HOM05D007861 ORTHO05D007271 1.2e-06 56.6 69 42.0
Gohir.A05G294400 Gossypium hirsutum HOM05D009695 ORTHO05D007271 1.2e-06 56.6 99 41.4
BraA04t17695Z Brassica rapa HOM05D014739 ORTHO05D007271 2.7e-06 55.5 92 40.2
Eucgr.G02861 Eucalyptus grandis HOM05D007861 ORTHO05D007271 4.7e-06 54.7 72 41.7
Gohir.D05G294900 Gossypium hirsutum HOM05D009695 ORTHO05D007271 4.7e-06 54.7 85 41.2
C04p57110 Brassica napus HOM05D014739 ORTHO05D007271 6.1e-06 54.3 92 40.2
Cfa001682 Carpinus fangiana HOM05D009695 ORTHO05D007271 6.1e-06 54.3 60 48.3
Eucgr.J00896 Eucalyptus grandis HOM05D007861 ORTHO05D007271 6.1e-06 54.3 61 47.5
Gorai.009G311600 Gossypium raimondii HOM05D009695 ORTHO05D007271 6.1e-06 54.3 93 39.8
Lsat_1_v5_gn_6_43600 Lactuca sativa HOM05D007861 ORTHO05D007271 6.1e-06 54.3 40 62.5


User provided reference genes

Program Settings