Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 6.0e-83 310.8 163 100.0
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 3.7e-64 248.4 160 75.0
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 6.3e-64 247.7 163 72.4
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 6.3e-64 247.7 164 74.4
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 6.9e-63 244.2 163 71.8
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.9e-60 236.1 159 69.8
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 2.1e-59 232.6 160 70.6
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.0e-58 230.3 162 69.1
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 3.9e-58 228.4 163 69.3
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 5.1e-58 228.0 162 70.4
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 2.0e-57 226.1 159 71.7
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 3.3e-57 225.3 163 65.6
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 3.3e-57 225.3 172 63.4
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 3.3e-57 225.3 164 68.9
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 5.7e-57 224.6 167 70.1
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 9.7e-57 223.8 163 68.7
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.7e-56 223.0 163 69.3
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.8e-55 219.5 165 65.5
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 9.1e-55 217.2 175 60.6
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.2e-54 216.9 158 67.1
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.2e-54 216.9 163 63.2
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.2e-54 216.9 168 64.9
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 1.5e-54 216.5 156 67.3
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 4.5e-54 214.9 161 64.6
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 4.5e-54 214.9 157 66.2
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 5.9e-54 214.5 157 66.2
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.7e-53 213.0 171 62.0
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 2.9e-53 212.2 179 62.0
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 3.8e-53 211.8 177 61.0
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.5e-52 209.1 176 63.6
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 3.2e-52 208.8 158 63.9
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 4.2e-52 208.4 164 62.8
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 4.2e-52 208.4 156 67.3
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 9.4e-52 207.2 166 62.7
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 1.6e-51 206.5 160 62.5
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.1e-51 206.1 176 63.1
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 8.0e-51 204.1 159 62.9
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 1.0e-50 203.8 154 70.1
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.3e-49 198.7 161 64.0
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 7.4e-49 197.6 161 63.4
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.1e-47 193.7 202 52.5
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.4e-47 193.4 173 60.7
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 1.4e-47 193.4 158 60.1
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 1.8e-47 193.0 175 60.6
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 2.4e-47 192.6 176 60.2
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 3.1e-47 192.2 169 58.6
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 3.1e-47 192.2 174 59.8
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 4.1e-47 191.8 156 65.4
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 2.6e-46 189.1 162 58.0
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 7.7e-46 187.6 160 58.1
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 1.0e-45 187.2 165 56.4
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.0e-45 187.2 175 58.3
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 8.5e-45 184.1 129 66.7
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 4.2e-44 181.8 159 61.0
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 4.2e-44 181.8 168 57.1
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 2.7e-43 179.1 193 51.3
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 2.7e-43 179.1 173 55.5
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 4.7e-43 178.3 165 53.9
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 4.0e-42 175.3 156 55.8
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 6.8e-42 174.5 162 54.9
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.5e-41 173.3 153 57.5
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 3.4e-41 172.2 156 54.5
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 1.7e-40 169.9 163 51.5
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 1.7e-40 169.9 163 52.1
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 1.7e-40 169.9 163 51.5
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 1.7e-40 169.9 163 52.1
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 2.2e-40 169.5 163 51.5
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 2.2e-40 169.5 153 53.6
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 2.2e-40 169.5 148 56.1
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 3.7e-40 168.7 155 54.2
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.1e-39 167.2 159 52.2
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 2.4e-39 166.0 159 50.9
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 2.4e-39 166.0 162 53.1
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.4e-39 166.0 173 50.3
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 3.1e-39 165.6 159 53.5
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 4.1e-39 165.2 165 50.3
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 7.0e-39 164.5 168 50.0
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 9.1e-39 164.1 154 52.6
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 5.9e-38 161.4 161 52.8
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 5.9e-38 161.4 152 55.3
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 1.0e-37 160.6 155 54.8
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 8.5e-37 157.5 159 52.2
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 9.4e-36 154.1 164 50.6
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.2e-33 147.1 157 45.2
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 4.4e-33 145.2 166 47.0
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 5.7e-33 144.8 155 45.2
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 1.3e-32 143.7 103 69.9
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 6.3e-32 141.4 119 57.1
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.4e-31 140.2 155 44.5
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 5.9e-30 134.8 138 51.4
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 6.6e-29 131.3 154 44.8
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.8e-26 123.2 105 57.1
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 3.4e-25 119.0 152 42.1
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 3.9e-21 105.5 91 52.7
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 5.0e-21 105.1 117 50.4
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 4.3e-20 102.1 82 61.0
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 2.8e-19 99.4 105 49.5
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 6.8e-18 94.7 131 38.9
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.2e-17 94.0 79 59.5
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.7e-16 90.1 95 43.2
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 3.3e-12 75.9 49 73.5
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 4.9e-08 62.0 45 64.4
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 3.2e-07 59.3 36 66.7


User provided reference genes

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