Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 0.0e+00 1115.1 585 100.0
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 7.0e-174 614.8 541 64.9
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 1.2e-173 614.0 541 63.8
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 9.5e-171 604.4 510 64.1
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 2.1e-170 603.2 518 62.4
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 4.6e-165 585.5 520 61.5
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 7.8e-165 584.7 514 62.3
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.7e-164 583.6 508 63.0
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 4.4e-160 568.9 518 60.8
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 9.2e-158 561.2 510 60.2
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 1.6e-157 560.5 516 60.3
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 8.6e-156 554.7 505 60.6
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 8.6e-156 554.7 515 60.4
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 1.5e-155 553.9 469 65.2
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.5e-155 553.1 522 59.4
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 3.3e-155 552.7 538 57.8
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 9.5e-155 551.2 505 60.6
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.1e-154 550.1 507 60.2
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 3.6e-154 549.3 507 60.0
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 4.7e-154 548.9 507 60.9
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.1e-153 547.7 544 56.4
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.8e-152 542.0 544 56.1
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 1.7e-151 540.4 516 57.8
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 1.1e-150 537.7 515 58.1
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 6.6e-148 528.5 516 56.4
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 1.5e-147 527.3 525 56.8
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 3.3e-147 526.2 505 57.0
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.1e-145 521.2 497 58.1
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 1.4e-145 520.8 525 55.0
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.7e-143 513.8 554 53.4
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 1.7e-143 513.8 513 56.1
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 2.9e-143 513.1 510 56.1
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 2.9e-143 513.1 517 56.9
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 4.9e-143 512.3 516 57.0
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 8.7e-140 501.5 522 54.8
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.1e-139 501.1 522 55.4
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.9e-139 500.4 512 52.9
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 1.6e-138 497.3 514 54.1
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.1e-137 494.6 509 53.4
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 2.6e-136 490.0 495 57.0
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 7.6e-136 488.4 523 51.4
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 1.3e-135 487.6 504 54.2
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.4e-134 484.2 519 52.6
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 1.9e-134 483.8 499 52.9
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 7.1e-134 481.9 512 52.3
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 6.0e-133 478.8 525 52.6
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.0e-132 478.0 456 58.8
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.3e-132 477.6 497 55.3
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 1.7e-132 477.2 529 52.6
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 2.3e-132 476.9 513 51.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 3.0e-132 476.5 473 57.3
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 5.1e-132 475.7 568 51.2
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 6.6e-132 475.3 413 60.5
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.1e-131 474.6 519 53.8
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 3.3e-131 473.0 500 53.0
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 3.3e-131 473.0 514 52.1
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 7.3e-131 471.9 520 51.2
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 9.6e-131 471.5 505 52.9
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.6e-130 469.5 516 53.1
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 2.4e-129 466.8 520 49.8
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 5.3e-129 465.7 519 51.3
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 1.3e-127 461.1 520 51.3
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 2.2e-127 460.3 582 47.9
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 4.9e-127 459.1 506 53.0
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 1.4e-126 457.6 513 52.0
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 4.2e-126 456.1 516 52.9
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 7.1e-126 455.3 463 55.3
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 9.3e-126 454.9 534 50.2
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 3.5e-125 453.0 518 51.2
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 4.6e-125 452.6 526 51.0
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 7.9e-125 451.8 409 60.9
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.3e-124 451.1 463 54.9
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.3e-124 451.1 463 54.9
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 6.7e-124 448.7 528 50.2
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 8.7e-124 448.4 482 53.5
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 4.3e-123 446.0 502 51.6
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.4e-121 441.0 470 52.8
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 6.9e-121 438.7 453 55.2
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 7.6e-120 435.3 521 49.5
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 1.3e-119 434.5 535 49.7
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.2e-117 427.9 523 48.2
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 2.3e-116 423.7 479 50.3
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 2.3e-116 423.7 521 47.8
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 3.0e-116 423.3 578 46.5
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 1.5e-115 421.0 493 50.7
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 8.2e-114 415.2 538 49.1
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 3.4e-112 409.8 375 60.5
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 3.8e-111 406.4 465 50.8
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 3.5e-109 399.8 353 63.7
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 2.1e-101 374.0 494 43.9
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 7.9e-101 372.1 410 52.2
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.1e-97 361.7 436 49.5
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 7.9e-93 345.5 572 39.9
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 6.1e-85 319.3 500 40.2
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.3e-84 317.4 341 51.3
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 6.7e-84 315.8 500 40.0
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 3.0e-76 290.4 449 43.2
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 1.7e-74 284.6 509 38.1
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 4.0e-68 263.5 528 34.5
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 5.2e-68 263.1 438 39.3
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 2.6e-67 260.8 203 66.5
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 5.0e-63 246.5 404 37.6
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 1.8e-60 238.0 350 40.0
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 9.8e-59 232.3 272 50.4
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 2.2e-58 231.1 209 59.8
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.4e-57 228.4 212 59.4
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 3.5e-56 223.8 323 38.7
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 1.9e-49 201.4 196 55.1
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 2.1e-45 188.0 149 68.5
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 9.2e-41 172.6 199 49.7
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 8.1e-37 159.5 167 53.3
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 3.9e-31 140.6 278 37.1
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 1.6e-24 118.6 270 32.6
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 1.1e-20 105.9 138 45.7
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.8e-20 105.1 87 64.4
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 9.6e-14 82.8 131 41.2
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.4e-12 79.0 70 54.3
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 6.9e-12 76.6 127 37.0
Haze_23490 Corylus avellana HOM05D006347 ORTHO05D007835 1.5e-11 75.5 175 33.7
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 7.6e-11 73.2 137 35.8
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.6e-08 65.5 65 60.0
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 6.0e-08 63.5 36 75.0
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 1.8e-07 62.0 116 37.9
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 3.0e-07 61.2 90 42.2
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 1.1e-06 59.3 114 33.3
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 2.5e-06 58.2 114 32.5


User provided reference genes

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