Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 6.1e-73 277.3 135 100.0
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.2e-63 246.5 135 88.1
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 6.4e-62 240.7 135 83.7
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.8e-61 239.2 135 84.4
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 2.3e-59 232.3 135 80.7
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 5.6e-58 227.6 133 78.9
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 5.8e-55 217.6 135 78.5
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 2.2e-54 215.7 132 78.0
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 4.9e-54 214.5 137 76.6
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 6.4e-54 214.2 135 78.5
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 8.3e-54 213.8 137 77.4
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.9e-53 212.6 135 77.0
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 1.9e-53 212.6 134 76.1
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 4.1e-53 211.5 138 72.5
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 7.0e-53 210.7 129 79.1
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 9.2e-53 210.3 137 74.5
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 3.5e-52 208.4 137 75.9
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 1.0e-51 206.8 137 75.9
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 1.7e-51 206.1 131 74.0
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 2.3e-51 205.7 138 73.9
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 2.3e-51 205.7 135 76.3
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 2.3e-51 205.7 133 73.7
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 3.0e-51 205.3 128 75.0
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 3.9e-51 204.9 134 74.6
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 3.9e-51 204.9 133 72.2
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 2.5e-50 202.2 141 72.3
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 5.6e-50 201.1 128 73.4
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 2.1e-49 199.1 134 72.4
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 2.8e-49 198.7 138 73.9
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 2.8e-49 198.7 138 68.1
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 2.8e-49 198.7 135 71.1
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 2.3e-48 195.7 135 65.2
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 5.2e-48 194.5 138 64.5
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 5.2e-48 194.5 135 65.2
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 2.6e-47 192.2 136 64.7
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 3.4e-47 191.8 136 64.7
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 3.4e-47 191.8 135 64.4
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 3.4e-47 191.8 135 64.4
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 3.4e-47 191.8 135 64.4
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 4.4e-47 191.4 135 64.4
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 4.4e-47 191.4 135 64.4
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 7.5e-47 190.7 132 71.2
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.7e-46 189.5 142 66.2
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 1.7e-46 189.5 141 66.7
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.7e-46 189.5 135 63.0
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 4.9e-46 188.0 136 67.6
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 8.3e-46 187.2 139 66.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 8.3e-46 187.2 138 63.0
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 8.3e-46 187.2 138 68.1
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 8.3e-46 187.2 138 68.1
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 1.1e-45 186.8 169 59.8
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 1.4e-45 186.4 136 66.9
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 5.4e-45 184.5 142 66.2
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 9.2e-45 183.7 135 67.4
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 1.2e-44 183.3 135 62.2
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 1.6e-44 183.0 128 69.5
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 1.6e-44 183.0 139 67.6
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.6e-44 183.0 138 66.7
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 2.7e-44 182.2 133 65.4
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 1.0e-43 180.3 157 61.8
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 1.7e-43 179.5 134 65.7
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 3.9e-43 178.3 138 65.9
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 6.6e-43 177.6 138 64.5
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 8.6e-43 177.2 137 65.7
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 1.1e-42 176.8 142 64.1
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 1.1e-42 176.8 133 69.2
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 1.5e-42 176.4 142 63.4
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 3.3e-42 175.3 135 64.4
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 7.3e-42 174.1 135 63.7
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.2e-41 173.3 138 65.2
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 1.2e-41 173.3 136 63.2
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.2e-41 173.3 136 66.2
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.1e-40 170.2 135 63.0
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 1.3e-38 163.3 132 65.9
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 3.2e-37 158.7 98 78.6
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 7.1e-37 157.5 106 70.8
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 9.2e-37 157.1 145 56.6
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 9.2e-37 157.1 138 57.2
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 2.1e-36 156.0 97 75.3
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 1.0e-35 153.7 132 59.1
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 5.1e-35 151.4 132 58.3
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 5.1e-35 151.4 118 63.6
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 9.6e-34 147.1 100 70.0
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 6.9e-32 141.0 99 70.7
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 3.4e-31 138.7 133 58.6
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 1.4e-29 133.3 101 68.3
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.7e-27 126.3 98 60.2
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 3.9e-27 125.2 95 65.3
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.5e-26 123.2 101 65.3
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.5e-26 122.5 135 47.4
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.5e-26 122.5 135 47.4
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 4.3e-26 121.7 140 49.3
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 9.6e-26 120.6 142 52.1
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 2.1e-25 119.4 121 53.7
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 2.8e-25 119.0 149 49.0
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 6.2e-25 117.9 94 64.9
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 1.2e-20 103.6 130 42.3
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 3.0e-19 99.0 100 52.0
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 9.6e-18 94.0 78 59.0
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 1.6e-17 93.2 80 53.8
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 2.1e-17 92.8 80 61.2
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.8e-16 89.7 105 41.0
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 9.9e-15 84.0 105 48.6
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 2.3e-11 72.8 40 87.5
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 1.5e-10 70.1 89 46.1
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 5.6e-10 68.2 65 55.4
Actinidia14340 Actinidia chinensis HOM05D007233 ORTHO05D009043 6.2e-09 64.7 56 55.4


User provided reference genes

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