Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 8.3e-49 196.8 106 100.0
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 1.7e-33 146.0 106 80.2
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 3.5e-23 111.7 107 65.4
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 1.1e-19 100.1 107 60.7
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 2.4e-16 89.0 97 56.7
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 2.4e-16 89.0 98 58.2
Sabra09G0116800 Salix brachista HOM05D008128 ORTHO05D010259 3.2e-16 88.6 96 62.5
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.6e-15 86.3 97 55.7
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 2.7e-15 85.5 105 59.0
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 1.3e-14 83.2 106 56.6
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 1.3e-14 83.2 64 67.2
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 8.6e-14 80.5 65 66.2
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 2.5e-13 79.0 104 53.8
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 3.3e-13 78.6 106 53.8
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 5.6e-13 77.8 106 54.7
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 7.3e-13 77.4 102 52.9
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 9.5e-13 77.0 98 53.1
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 1.6e-12 76.3 102 51.0
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 2.1e-12 75.9 106 52.8
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 2.8e-12 75.5 106 51.9
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 3.6e-12 75.1 105 54.3
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 3.6e-12 75.1 110 52.7
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 3.6e-12 75.1 95 50.5
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 4.7e-12 74.7 96 56.2
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 4.7e-12 74.7 108 52.8
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 6.2e-12 74.3 106 50.9
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 8.1e-12 73.9 114 50.9
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 8.1e-12 73.9 106 50.9
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.1e-11 73.6 110 48.2
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 1.4e-11 73.2 110 50.0
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 1.8e-11 72.8 99 52.5
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 3.1e-11 72.0 106 51.9
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 5.2e-11 71.2 102 46.1
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 6.8e-11 70.9 103 48.5
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 1.2e-10 70.1 106 49.1
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 1.2e-10 70.1 109 49.5
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 1.5e-10 69.7 107 49.5
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 1.5e-10 69.7 106 49.1
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.5e-10 69.7 108 50.0
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 1.5e-10 69.7 108 48.1
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 2.0e-10 69.3 106 49.1
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 2.0e-10 69.3 110 49.1
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 2.6e-10 68.9 106 50.9
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 5.8e-10 67.8 110 44.5
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 9.9e-10 67.0 97 47.4
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.3e-09 66.6 97 47.4
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 1.7e-09 66.2 102 48.0
QL01p013611 Quercus lobata HOM05D008128 ORTHO05D010259 1.7e-09 66.2 92 51.1
EL10Ac9g21090 Beta vulgaris HOM05D008128 ORTHO05D010259 3.8e-09 65.1 103 48.5
Actinidia05455 Actinidia chinensis HOM05D008128 ORTHO05D010259 8.4e-09 63.9 96 47.9
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 1.1e-08 63.5 70 57.1
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 4.1e-08 61.6 99 44.4
Ciclev10029344m.g Citrus clementina HOM05D008128 ORTHO05D010259 1.2e-07 60.1 99 45.5
Atru.chr3.3366 Acer truncatum HOM05D008128 ORTHO05D010259 3.5e-07 58.5 94 46.8
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 4.6e-07 58.2 102 42.2
TAR633G0657 Trochodendron aralioides HOM05D008128 ORTHO05D010259 1.7e-06 56.2 88 51.1
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 2.3e-06 55.8 100 47.0
CDE08G1127 Ceratophyllum demersum HOM05D003185 ORTHO05D007711 2.3e-06 55.8 105 44.8
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 3.0e-06 55.5 99 43.4
FAN11G2911 Fragaria x ananassa HOM05D008128 ORTHO05D010259 3.9e-06 55.1 99 40.4
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 6.6e-06 54.3 100 41.0


User provided reference genes

Program Settings