Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 3.8e-174 614.8 314 100.0
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 6.1e-132 474.6 308 77.9
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 1.3e-118 430.3 292 75.7
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 8.3e-113 411.0 293 73.0
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 2.9e-33 146.7 225 40.4
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 1.4e-32 144.4 301 37.2
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 5.5e-32 142.5 251 39.4
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 4.6e-31 139.4 250 38.4
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 1.3e-30 137.9 250 38.0
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 1.5e-29 134.4 229 38.4
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.5e-29 133.7 253 37.5
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 5.7e-29 132.5 245 36.7
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 9.7e-29 131.7 252 38.5
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 8.2e-28 128.6 249 36.5
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.1e-27 128.3 273 34.1
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 4.1e-27 126.3 246 35.8
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 6.9e-27 125.6 256 35.5
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 1.5e-26 124.4 251 35.5
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 7.7e-26 122.1 250 37.6
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 7.7e-26 122.1 246 39.4
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 6.5e-25 119.0 254 35.8
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.1e-24 118.2 253 37.5
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.5e-24 117.1 247 34.8
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 2.5e-24 117.1 198 39.4
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 4.2e-24 116.3 278 33.1
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 6.1e-23 112.5 242 37.6
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 6.1e-23 112.5 275 35.6
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 1.0e-22 111.7 265 33.2
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 5.1e-22 109.4 267 32.2
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 1.5e-21 107.8 267 31.8
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.3e-20 104.8 229 34.9
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 1.7e-20 104.4 253 31.6
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 4.8e-20 102.8 241 33.2
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 6.3e-20 102.4 265 31.3
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 3.1e-19 100.1 282 33.3
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 3.1e-19 100.1 166 37.3
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 3.1e-19 100.1 166 37.3
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 5.3e-19 99.4 284 32.4
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 5.3e-19 99.4 230 36.1
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 6.9e-19 99.0 261 29.9
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 9.1e-19 98.6 243 32.1
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 9.1e-19 98.6 264 34.1
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 1.5e-18 97.8 275 32.7
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.0e-18 97.4 270 31.9
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 3.4e-18 96.7 274 32.8
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 4.5e-18 96.3 284 32.0
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 1.0e-17 95.1 237 28.7
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 1.7e-17 94.4 277 31.0
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 2.9e-17 93.6 143 42.0
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.1e-16 91.7 260 30.0
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.9e-16 90.9 152 39.5
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 2.5e-16 90.5 222 31.5
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 4.2e-16 89.7 216 32.4
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 7.2e-16 89.0 278 28.4
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 2.7e-15 87.0 234 30.3
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 3.6e-15 86.7 253 29.6
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 3.6e-15 86.7 253 29.6
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.0e-14 85.1 259 30.5
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 1.4e-14 84.7 216 30.6
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 1.4e-14 84.7 276 27.9
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.3e-14 84.0 283 30.0
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 3.0e-14 83.6 252 29.0
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 5.2e-14 82.8 276 27.5
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 3.3e-13 80.1 231 29.9
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 3.3e-13 80.1 240 30.0
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.4e-13 79.7 243 30.0
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 5.7e-13 79.3 255 27.8
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.7e-12 77.8 270 27.4
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.7e-12 77.8 270 27.4
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.7e-12 76.6 266 27.1
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 1.8e-11 74.3 248 26.6
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 1.8e-11 74.3 242 32.2
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 4.1e-11 73.2 237 28.3
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 4.5e-10 69.7 221 28.5
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 5.9e-10 69.3 275 26.2
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.7e-09 67.8 249 28.1
EL10Ac9g22767 Beta vulgaris HOM05D000027 ORTHO05D000066 9.4e-08 62.0 253 25.3
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 1.6e-07 61.2 133 33.8
Thecc.07G062700 Theobroma cacao HOM05D008244 ORTHO05D009402 3.0e-06 57.0 256 26.2


User provided reference genes

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