Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 4.2e-170 601.3 306 100.0
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 3.5e-132 475.3 308 77.9
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 6.4e-118 427.9 292 74.0
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 8.9e-112 407.5 293 71.3
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 2.2e-33 147.1 256 36.7
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.1e-32 144.8 253 37.5
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 5.3e-32 142.5 246 38.6
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 9.1e-32 141.7 250 38.4
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 4.5e-31 139.4 297 35.4
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 4.5e-31 139.4 246 42.3
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.0e-30 138.3 222 41.4
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.7e-30 137.5 222 41.4
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 5.0e-30 136.0 250 37.6
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 5.0e-30 136.0 229 37.1
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 6.5e-30 135.6 250 36.8
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 8.5e-30 135.2 235 38.7
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 3.2e-29 133.3 250 37.2
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 8.0e-28 128.6 244 39.8
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 8.0e-28 128.6 230 39.6
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 1.0e-27 128.3 253 34.8
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 1.0e-27 128.3 248 35.9
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.2e-27 125.9 249 38.2
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 7.5e-26 122.1 241 37.8
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 7.5e-26 122.1 245 37.6
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 9.8e-26 121.7 258 37.6
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 1.7e-25 120.9 322 32.0
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.8e-25 120.2 241 38.6
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 4.8e-25 119.4 195 40.0
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 1.2e-23 114.8 324 30.9
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 1.2e-23 114.8 258 34.5
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 3.5e-23 113.2 288 31.6
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 7.7e-23 112.1 275 34.2
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 1.3e-22 111.3 274 33.9
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 1.7e-22 110.9 250 33.6
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 2.2e-22 110.5 288 31.2
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 6.5e-22 109.0 241 34.4
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 8.5e-22 108.6 249 35.3
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.1e-21 108.2 248 35.5
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.5e-21 107.8 288 31.2
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 9.4e-21 105.1 247 30.0
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 2.7e-20 103.6 243 32.9
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 5.2e-19 99.4 262 29.4
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 6.8e-19 99.0 286 30.4
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 2.0e-18 97.4 232 31.5
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 3.4e-18 96.7 257 33.5
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.7e-17 94.4 220 30.9
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 4.9e-17 92.8 283 30.4
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 4.9e-17 92.8 286 26.6
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 6.3e-17 92.4 229 31.4
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 8.3e-17 92.0 262 29.4
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.1e-16 91.7 246 30.5
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 1.1e-16 91.7 166 33.7
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 1.1e-16 91.7 166 33.7
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 2.4e-16 90.5 231 32.5
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 2.4e-16 90.5 140 42.1
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 3.1e-16 90.1 271 29.2
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 3.1e-16 90.1 286 29.0
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 3.1e-16 90.1 237 32.1
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 5.4e-16 89.4 249 29.7
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 9.1e-16 88.6 276 26.8
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.0e-15 87.4 159 39.6
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 3.5e-15 86.7 212 32.1
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 7.7e-15 85.5 215 30.7
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 7.7e-15 85.5 239 30.5
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.3e-14 84.7 282 29.8
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 3.8e-14 83.2 228 32.5
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 5.0e-14 82.8 265 27.2
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 1.5e-13 81.3 218 30.3
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 1.5e-13 81.3 248 26.6
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.5e-13 81.3 293 29.0
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.5e-13 81.3 217 30.9
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 2.5e-13 80.5 253 27.3
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 2.5e-13 80.5 240 28.8
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 7.2e-13 79.0 253 27.3
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.8e-12 77.0 249 28.9
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.8e-12 77.0 275 25.1
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.8e-12 77.0 275 25.1
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 6.1e-12 75.9 253 28.1
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 6.1e-12 75.9 253 28.1
Zm00001eb096930 Zea mays HOM05D007873 ORTHO05D008474 3.0e-11 73.6 286 25.2
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 1.2e-10 71.6 302 25.8
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 5.7e-10 69.3 216 28.7
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 9.8e-10 68.6 266 25.6
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.2e-09 67.4 227 28.2
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 2.9e-09 67.0 132 34.8
AUR62027670 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.7e-09 66.6 217 27.6
EL10Ac9g22767 Beta vulgaris HOM05D000027 ORTHO05D000066 8.3e-09 65.5 252 25.4
Thecc.07G041100 Theobroma cacao HOM05D008244 ORTHO05D009402 8.3e-09 65.5 264 27.7
Thecc.07G041300 Theobroma cacao HOM05D008244 ORTHO05D009402 9.2e-08 62.0 204 29.4
Ah.13g070250 Amaranthus hybridus HOM05D008909 ORTHO05D008474 7.8e-07 58.9 215 27.4
TWI14G1100 Tripterygium wilfordii HOM05D008244 ORTHO05D009402 1.3e-06 58.2 215 28.4


User provided reference genes

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