Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 9.0e-162 573.5 295 100.0
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 5.0e-152 541.2 296 95.6
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 1.9e-119 433.0 292 75.7
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 2.1e-118 429.5 292 74.0
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 1.5e-36 157.5 295 37.6
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 4.5e-36 156.0 247 41.7
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 1.4e-34 151.0 232 42.2
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 1.4e-34 151.0 247 40.1
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 1.4e-34 151.0 247 40.5
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 3.0e-32 143.3 246 37.8
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 8.8e-32 141.7 222 39.6
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 1.5e-31 141.0 246 42.7
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 5.7e-31 139.0 253 39.1
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 2.2e-30 137.1 229 38.4
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 2.8e-30 136.7 245 39.2
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.4e-29 134.4 246 37.0
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 2.4e-29 133.7 230 40.9
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.3e-29 132.5 246 37.0
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 1.5e-28 131.0 253 36.8
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 2.0e-28 130.6 296 33.1
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.6e-28 130.2 253 38.7
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.0e-27 128.3 241 39.4
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 3.8e-27 126.3 231 39.4
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 3.8e-27 126.3 248 35.5
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 6.5e-27 125.6 241 39.4
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 5.5e-26 122.5 258 34.5
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 3.6e-25 119.8 258 34.1
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 4.7e-25 119.4 208 39.9
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 1.0e-24 118.2 257 37.0
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 1.4e-24 117.9 285 31.6
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 3.0e-24 116.7 258 33.7
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 2.0e-23 114.0 196 38.3
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 7.4e-23 112.1 277 32.1
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 2.2e-22 110.5 243 35.0
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 4.8e-22 109.4 277 35.4
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 1.4e-21 107.8 227 37.9
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 1.8e-21 107.5 241 34.0
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 3.1e-21 106.7 235 34.5
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 4.1e-21 106.3 281 32.7
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 1.2e-20 104.8 281 32.7
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 1.6e-20 104.4 237 30.4
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.5e-20 102.8 245 33.9
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.0e-19 101.7 282 31.6
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 1.7e-19 100.9 177 35.0
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 1.7e-19 100.9 177 35.0
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 1.5e-18 97.8 140 43.6
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 3.2e-18 96.7 232 32.3
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 4.2e-18 96.3 275 29.1
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 7.2e-18 95.5 145 42.8
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.2e-17 94.7 237 32.5
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.6e-17 94.4 255 30.2
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 3.6e-17 93.2 231 30.7
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 3.6e-17 93.2 261 31.4
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 4.7e-17 92.8 226 33.6
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 1.0e-16 91.7 251 28.7
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 2.0e-15 87.4 240 31.2
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 2.6e-15 87.0 235 31.9
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 5.7e-15 85.9 269 29.7
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 9.7e-15 85.1 241 30.7
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 9.7e-15 85.1 212 31.1
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.3e-14 84.7 223 31.4
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.2e-14 84.0 280 30.0
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 8.3e-14 82.0 267 29.2
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 2.4e-13 80.5 214 30.4
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 4.1e-13 79.7 220 33.2
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 5.3e-13 79.3 289 27.3
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 5.3e-13 79.3 289 27.3
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 9.1e-13 78.6 215 30.2
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 9.1e-13 78.6 264 28.4
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.6e-12 77.8 264 25.8
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 3.5e-12 76.6 260 27.7
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 5.9e-12 75.9 214 30.8
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 5.9e-12 75.9 260 27.7
Zm00001eb096930 Zea mays HOM05D007873 ORTHO05D008474 2.2e-11 73.9 294 27.6
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 5.0e-11 72.8 268 26.1
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 5.0e-11 72.8 268 26.1
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.5e-10 70.5 228 28.9
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 2.5e-10 70.5 249 25.3
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 5.5e-10 69.3 266 27.4
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 2.7e-09 67.0 285 26.7
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 3.6e-09 66.6 127 34.6
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 4.0e-08 63.2 248 26.2
Thecc.07G041300 Theobroma cacao HOM05D008244 ORTHO05D009402 8.8e-08 62.0 204 27.5
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 7.5e-07 58.9 216 26.4
SGA_v2.0_scaffold20G09231 Striga asiatica HOM05D031313 ORTHO05D030683 2.8e-06 57.0 231 25.5
AUR62027670 Chenopodium quinoa HOM05D008909 ORTHO05D008474 4.8e-06 56.2 213 26.3
Duzib147G1272 Durio zibethinus HOM05D007873 ORTHO05D008474 6.3e-06 55.8 103 33.0


User provided reference genes

Program Settings