Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 5.4e-191 671.4 499 100.0
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 3.5e-65 253.4 501 53.5
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 1.2e-60 238.4 499 56.1
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 4.3e-55 219.9 502 56.6
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.7e-51 208.0 509 55.4
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 3.8e-51 206.8 374 39.6
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 8.4e-51 205.7 363 41.6
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 5.4e-50 203.0 499 58.3
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 6.0e-49 199.5 511 52.1
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.7e-48 198.0 312 43.9
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 3.0e-48 197.2 498 54.6
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 6.6e-48 196.1 502 57.2
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 6.6e-48 196.1 499 51.1
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 1.3e-46 191.8 500 54.6
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 4.8e-46 189.9 499 55.5
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 8.1e-46 189.1 359 39.3
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 8.1e-46 189.1 521 42.6
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.4e-45 188.3 529 39.1
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 3.1e-45 187.2 560 50.2
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 7.6e-44 182.6 506 50.0
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 1.4e-42 178.3 505 48.5
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 9.3e-42 175.6 499 48.7
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 4.6e-41 173.3 501 51.7
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 2.3e-40 171.0 505 45.1
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 2.3e-40 171.0 363 36.1
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 3.9e-40 170.2 502 49.6
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 6.6e-40 169.5 518 49.4
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 1.9e-39 167.9 507 48.3
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 2.5e-39 167.5 500 51.8
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 3.3e-39 167.2 503 49.5
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 2.1e-38 164.5 499 50.5
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 2.1e-38 164.5 495 51.3
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 3.6e-38 163.7 506 43.7
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 3.1e-37 160.6 503 43.1
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 5.3e-37 159.8 224 46.4
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 6.9e-37 159.5 496 51.4
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 9.0e-37 159.1 508 52.6
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 2.0e-36 157.9 496 51.2
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 4.5e-36 156.8 501 48.3
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 9.9e-36 155.6 295 38.3
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.3e-35 155.2 319 38.2
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.3e-35 155.2 319 38.2
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 2.2e-35 154.5 503 42.1
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 3.8e-35 153.7 509 52.3
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.9e-35 153.3 496 51.0
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 1.1e-34 152.1 361 34.6
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 4.2e-34 150.2 360 40.8
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 3.5e-33 147.1 499 50.1
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 3.0e-32 144.1 501 51.5
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 3.9e-32 143.7 507 50.1
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.9e-31 141.4 500 48.2
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 3.3e-31 140.6 500 46.2
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 4.3e-31 140.2 452 54.0
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 5.6e-31 139.8 500 50.8
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.8e-30 137.5 500 40.6
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 8.1e-30 136.0 525 47.4
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 8.1e-30 136.0 521 47.0
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 8.1e-30 136.0 497 51.9
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 1.4e-29 135.2 526 47.3
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 3.1e-29 134.0 504 49.4
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 4.0e-29 133.7 513 47.4
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 5.3e-29 133.3 502 50.4
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 9.0e-29 132.5 503 50.3
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 2.0e-28 131.3 498 41.0
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 2.6e-28 131.0 366 40.2
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 4.5e-28 130.2 499 48.9
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 5.8e-28 129.8 499 47.9
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 1.0e-27 129.0 344 52.6
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 1.7e-27 128.3 508 42.9
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 2.2e-27 127.9 500 45.0
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.9e-26 124.8 344 32.0
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 1.2e-25 122.1 496 48.2
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.3e-24 118.6 138 49.3
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 1.8e-24 118.2 496 46.8
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 1.8e-24 118.2 500 48.4
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 3.0e-24 117.5 294 34.0
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 6.7e-24 116.3 509 47.3
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 8.7e-24 115.9 503 50.7
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 1.1e-23 115.5 123 65.0
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 7.4e-23 112.8 498 45.6
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 9.6e-23 112.5 306 56.9
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 2.4e-21 107.8 512 46.5
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 5.3e-21 106.7 422 49.8
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 2.0e-20 104.8 290 32.1
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.0e-19 102.4 104 52.9
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 2.5e-18 97.8 297 31.0
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 2.3e-16 91.3 505 45.5
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 3.0e-16 90.9 503 39.4
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 1.9e-15 88.2 504 48.2
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 4.3e-15 87.0 502 46.8
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 7.4e-15 86.3 498 47.2
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 1.3e-14 85.5 274 69.0
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 2.2e-14 84.7 501 45.1
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 2.2e-14 84.7 274 69.0
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.2e-14 84.7 377 56.8
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 3.1e-13 80.9 503 46.7
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 1.3e-11 75.5 294 29.6
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 1.7e-11 75.1 137 42.3
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 3.2e-10 70.9 494 45.5
BolC9t58300H Brassica oleracea HOM05D012474 ORTHO05D008520 4.2e-10 70.5 494 44.9
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 4.2e-10 70.5 411 46.7
AT5G22320 Arabidopsis thaliana HOM05D012474 ORTHO05D008520 1.6e-09 68.6 278 65.8
CANSAT78G2361 Cannabis sativa HOM05D000107 ORTHO05D000062 3.0e-08 64.3 44 70.5
COL.COLO4_22633 Corchorus olitorius HOM05D007535 ORTHO05D008520 3.9e-08 63.9 189 31.7
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 8.8e-08 62.8 289 28.4
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 5.7e-07 60.1 46 65.2
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.3e-06 58.9 46 65.2


User provided reference genes

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