Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 5.3e-84 314.3 157 100.0
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 1.4e-49 199.9 126 77.8
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.2e-48 196.8 123 78.0
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 1.2e-48 196.8 148 64.9
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 1.6e-48 196.4 128 75.0
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 1.8e-47 193.0 147 66.7
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 1.8e-47 193.0 115 79.1
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 1.8e-47 193.0 141 67.4
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 3.0e-47 192.2 156 62.8
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 3.9e-47 191.8 116 80.2
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 3.9e-47 191.8 116 80.2
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 5.1e-47 191.4 144 68.8
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 5.1e-47 191.4 134 70.9
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 3.3e-46 188.7 152 65.1
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 1.3e-45 186.8 127 70.9
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.7e-45 185.3 116 75.9
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 4.8e-45 184.9 127 74.0
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 4.8e-45 184.9 127 74.0
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 6.3e-45 184.5 130 70.0
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 6.3e-45 184.5 125 72.0
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 8.2e-45 184.1 123 72.4
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 1.1e-44 183.7 140 69.3
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.4e-44 183.3 140 69.3
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 1.4e-44 183.3 134 67.2
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 3.1e-44 182.2 116 75.0
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 9.1e-44 180.6 152 60.5
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 1.2e-43 180.3 139 65.5
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 1.2e-43 180.3 129 67.4
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.5e-43 179.9 113 76.1
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 2.0e-43 179.5 114 74.6
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 2.6e-43 179.1 121 72.7
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 2.6e-43 179.1 135 69.6
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 4.5e-43 178.3 132 68.9
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 4.5e-43 178.3 133 66.9
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 5.9e-43 177.9 119 73.1
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 7.7e-43 177.6 128 64.1
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 7.7e-43 177.6 105 79.0
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.0e-42 177.2 135 62.2
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 1.0e-42 177.2 151 60.9
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 1.3e-42 176.8 113 76.1
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 1.3e-42 176.8 113 76.1
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 1.3e-42 176.8 116 71.6
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.7e-42 176.4 128 70.3
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 2.2e-42 176.0 142 64.8
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 2.2e-42 176.0 142 64.8
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 2.2e-42 176.0 114 71.9
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 2.2e-42 176.0 114 71.9
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 2.9e-42 175.6 115 73.0
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 2.9e-42 175.6 148 60.1
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 3.8e-42 175.3 117 68.4
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 5.0e-42 174.9 120 74.2
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 5.0e-42 174.9 142 64.1
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 5.0e-42 174.9 140 62.9
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 6.5e-42 174.5 120 71.7
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 8.5e-42 174.1 130 66.9
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.1e-41 173.7 117 71.8
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 1.9e-41 172.9 113 75.2
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 2.5e-41 172.6 112 75.0
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 3.2e-41 172.2 135 60.0
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 3.2e-41 172.2 116 72.4
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 3.2e-41 172.2 136 64.7
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 3.2e-41 172.2 136 64.7
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 4.2e-41 171.8 136 64.0
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 4.2e-41 171.8 138 62.3
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 5.5e-41 171.4 136 62.5
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 7.2e-41 171.0 134 62.7
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 2.1e-40 169.5 130 65.4
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 3.6e-40 168.7 130 66.2
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 4.7e-40 168.3 165 58.8
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 4.7e-40 168.3 179 52.0
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 6.1e-40 167.9 149 61.1
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 6.1e-40 167.9 142 61.3
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 1.0e-39 167.2 135 60.0
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.0e-39 167.2 116 67.2
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.4e-39 166.8 119 70.6
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 1.8e-39 166.4 113 69.0
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 1.8e-39 166.4 114 70.2
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 3.0e-39 165.6 116 70.7
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 3.0e-39 165.6 116 69.0
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 8.8e-39 164.1 143 58.7
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 2.6e-38 162.5 149 57.0
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 4.4e-38 161.8 133 63.2
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 1.3e-37 160.2 131 61.1
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 6.3e-37 157.9 116 66.4
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 8.2e-37 157.5 134 61.2
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 1.1e-36 157.1 113 64.6
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 5.9e-35 151.4 145 56.6
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.3e-34 150.2 102 71.6
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 6.5e-34 147.9 89 79.8
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 9.4e-33 144.1 90 73.3
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.4e-31 140.2 144 53.5
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 5.2e-31 138.3 96 68.8
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 5.2e-31 138.3 101 64.4
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 2.2e-29 132.9 113 54.9
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 8.2e-29 131.0 130 54.6
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.1e-28 130.6 132 56.8
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 1.8e-28 129.8 142 51.4
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 3.1e-28 129.0 123 48.8
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 9.1e-28 127.5 137 51.1
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 2.0e-27 126.3 74 79.7
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 2.7e-27 125.9 130 53.1
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 2.7e-27 125.9 117 57.3
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.9e-25 119.8 98 60.2
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 3.2e-25 119.0 73 75.3
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 1.8e-23 113.2 137 46.7
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.8e-21 105.9 122 48.4
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.3e-18 97.1 54 87.0
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.5e-17 92.8 50 80.0
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 3.3e-17 92.4 65 72.3
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 8.0e-16 87.8 69 65.2
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 3.0e-15 85.9 48 83.3
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 3.0e-15 85.9 73 54.8
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.7e-11 72.8 93 46.2
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 1.3e-10 70.5 102 35.3
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 6.6e-10 68.2 65 47.7
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 4.3e-09 65.5 81 48.1
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 4.7e-08 62.0 59 62.7


User provided reference genes

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