Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 2.0e-132 475.7 230 100.0
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 7.2e-98 360.9 231 73.6
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 1.2e-97 360.1 227 74.9
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 4.7e-97 358.2 219 74.0
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 4.7e-97 358.2 228 74.1
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 7.9e-97 357.5 227 74.4
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 7.9e-97 357.5 231 72.3
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 7.9e-97 357.5 219 73.5
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 8.8e-96 354.0 220 72.7
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 2.2e-94 349.4 237 70.9
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 2.4e-93 345.9 221 73.3
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 3.1e-93 345.5 221 71.0
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 3.1e-93 345.5 222 69.8
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 7.0e-93 344.4 226 69.9
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 7.0e-93 344.4 229 70.7
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 9.1e-93 344.0 227 70.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 9.1e-93 344.0 222 69.4
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.0e-92 342.8 222 73.4
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.5e-92 342.0 214 71.0
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.5e-92 341.7 215 72.6
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 4.5e-92 341.7 230 69.1
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 1.3e-91 340.1 230 68.3
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 1.7e-91 339.7 228 71.1
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 1.7e-91 339.7 219 71.7
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.9e-91 339.0 227 69.2
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 3.8e-91 338.6 214 73.4
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 2.5e-90 335.9 213 71.8
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 2.1e-89 332.8 227 67.0
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 2.7e-89 332.4 230 66.5
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.7e-89 332.4 227 67.8
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 2.7e-89 332.4 225 69.3
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 3.6e-89 332.0 230 67.4
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.0e-88 330.5 230 66.5
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.0e-88 330.5 238 66.4
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 1.4e-88 330.1 230 66.5
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 3.0e-88 328.9 216 69.9
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 5.2e-88 328.2 218 68.8
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 5.2e-88 328.2 230 64.3
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 8.8e-88 327.4 227 66.1
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 1.1e-87 327.0 238 66.0
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.1e-87 327.0 219 69.4
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 2.6e-87 325.9 224 67.4
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 2.6e-87 325.9 216 69.0
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 4.4e-87 325.1 224 67.4
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 5.7e-87 324.7 224 69.2
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 7.4e-87 324.3 229 65.9
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 7.4e-87 324.3 204 73.5
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 9.7e-87 323.9 221 68.8
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 1.7e-86 323.2 222 65.8
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 3.7e-86 322.0 229 67.7
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 3.7e-86 322.0 216 68.1
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 4.8e-86 321.6 227 67.0
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 4.8e-86 321.6 212 70.3
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 1.4e-85 320.1 215 67.0
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 2.4e-85 319.3 221 67.4
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.4e-85 319.3 218 67.4
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 2.4e-85 319.3 225 64.0
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 3.1e-85 318.9 216 67.6
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 5.3e-85 318.2 221 67.4
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 5.3e-85 318.2 213 66.7
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 1.2e-84 317.0 222 66.7
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 1.2e-84 317.0 222 66.7
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.2e-84 317.0 222 66.7
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 1.2e-84 317.0 222 66.7
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 1.6e-84 316.6 227 65.6
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.6e-84 316.6 217 67.3
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 2.6e-84 315.8 195 76.9
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 2.6e-84 315.8 215 67.0
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 1.0e-83 313.9 210 68.6
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.3e-83 313.5 222 65.8
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.3e-83 313.5 219 67.1
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 1.3e-83 313.5 227 63.4
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.2e-83 312.8 219 66.7
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.9e-83 312.4 231 63.2
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 6.5e-83 311.2 219 66.2
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.9e-82 309.7 222 64.9
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 1.6e-81 306.6 227 62.6
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 6.1e-81 304.7 219 63.9
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 3.0e-80 302.4 227 61.2
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.5e-79 300.1 215 64.2
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 2.0e-79 299.7 281 51.6
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 3.3e-79 298.9 218 62.8
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 1.2e-76 290.4 222 62.6
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 3.5e-76 288.9 230 57.8
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 4.5e-76 288.5 220 60.5
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.1e-74 283.9 248 55.2
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 5.5e-74 281.6 209 62.2
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 7.2e-74 281.2 198 65.7
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 2.1e-73 279.6 208 61.5
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 2.3e-72 276.2 225 58.7
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 4.0e-72 275.4 230 57.8
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 5.2e-72 275.0 209 62.2
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 5.7e-71 271.6 218 59.6
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 9.8e-71 270.8 208 59.1
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.2e-70 269.6 211 58.8
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.1e-69 267.3 175 68.0
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.3e-67 260.4 175 68.6
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 5.0e-67 258.5 174 69.0
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 5.2e-64 248.4 181 64.6
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 6.8e-64 248.1 175 64.6
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 4.9e-62 241.9 225 51.1
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 1.8e-61 240.0 223 51.1
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.1e-61 238.8 153 71.2
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.6e-60 236.9 219 53.9
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 7.8e-60 234.6 234 49.1
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.3e-59 233.8 213 55.4
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 1.6e-57 226.9 218 45.9
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 8.0e-57 224.6 213 50.2
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.7e-54 215.7 159 61.0
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 4.1e-53 212.2 157 64.3
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 5.4e-53 211.8 218 50.5
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 7.0e-53 211.5 178 59.6
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 3.0e-51 206.1 205 48.3
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.6e-49 200.3 206 46.1
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 7.5e-47 191.4 141 61.7
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.6e-41 173.7 166 52.4
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.4e-39 165.6 113 67.3
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 5.8e-31 138.7 222 32.4
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.7e-28 129.8 131 50.4
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 2.3e-27 126.7 82 69.5
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 3.4e-23 112.8 221 29.9
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 7.6e-23 111.7 94 54.3
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.3e-14 84.3 56 69.6
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 4.9e-14 82.4 159 33.3
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 5.4e-13 79.0 96 45.8
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 2.3e-11 73.6 119 31.1
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 8.7e-11 71.6 42 69.0
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 1.8e-08 63.9 47 55.3
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 7.6e-07 58.5 52 48.1


User provided reference genes

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