Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 1.5e-88 329.7 191 100.0
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 3.1e-38 162.5 98 84.7
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.5e-32 143.7 198 58.1
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 2.6e-32 142.9 192 50.5
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 2.8e-31 139.4 211 49.8
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.2e-29 134.0 193 49.2
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 1.2e-29 134.0 196 58.7
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 4.5e-29 132.1 201 48.3
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.0e-28 131.0 201 46.8
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 6.5e-28 128.3 209 48.3
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.1e-27 127.5 209 48.8
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.4e-27 127.1 193 53.9
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.4e-27 127.1 195 46.7
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 1.4e-27 127.1 201 45.3
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 1.9e-27 126.7 209 48.3
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 4.2e-27 125.6 209 45.9
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 9.4e-27 124.4 193 47.7
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 2.1e-26 123.2 217 43.3
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 2.7e-26 122.9 197 51.3
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 3.6e-26 122.5 206 44.2
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.1e-24 117.5 196 44.4
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 4.4e-24 115.5 196 52.6
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 4.4e-24 115.5 199 43.7
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 5.7e-24 115.2 212 42.0
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 1.3e-23 114.0 204 47.1
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 3.7e-23 112.5 208 42.8
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 4.8e-23 112.1 197 45.7
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 1.1e-22 110.9 204 48.0
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.4e-22 109.8 192 46.4
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 4.1e-22 109.0 192 43.2
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 9.1e-22 107.8 203 45.8
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 9.1e-22 107.8 203 45.8
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 9.1e-22 107.8 208 38.9
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.0e-21 106.7 192 45.3
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.0e-21 106.7 203 45.3
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 4.5e-21 105.5 189 41.3
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 7.7e-21 104.8 196 46.9
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 1.7e-20 103.6 204 45.1
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.9e-20 102.8 198 45.5
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 5.0e-20 102.1 191 40.8
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.5e-19 100.5 184 46.2
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 2.5e-19 99.8 153 46.4
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.2e-19 99.4 180 40.0
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 4.2e-19 99.0 207 41.1
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 7.2e-19 98.2 204 41.2
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 1.6e-18 97.1 201 39.3
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 2.7e-18 96.3 210 40.0
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 2.7e-18 96.3 207 39.6
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.6e-18 95.9 196 44.9
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 1.0e-17 94.4 208 38.0
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 1.8e-17 93.6 208 47.1
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 2.3e-17 93.2 201 38.8
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 3.0e-17 92.8 207 46.4
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 4.0e-17 92.4 205 43.9
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 5.2e-17 92.0 75 62.7
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 1.2e-16 90.9 193 40.4
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 1.5e-16 90.5 196 39.3
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 4.4e-16 89.0 205 38.0
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 5.7e-16 88.6 193 49.2
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 5.7e-16 88.6 157 43.9
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 9.7e-16 87.8 208 40.4
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 1.3e-15 87.4 194 38.7
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 4.8e-15 85.5 204 35.3
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 4.8e-15 85.5 57 75.4
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.1e-14 84.3 198 38.9
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 1.4e-14 84.0 184 38.6
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 1.8e-14 83.6 197 38.1
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 2.4e-14 83.2 205 37.1
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 4.1e-14 82.4 194 35.1
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 7.0e-14 81.6 74 58.1
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 9.1e-14 81.3 208 34.1
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 9.1e-14 81.3 205 32.7
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 1.3e-12 77.4 208 35.6
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 1.3e-12 77.4 208 35.6
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 1.7e-12 77.0 198 40.4
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.2e-12 76.6 206 37.4
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 2.9e-12 76.3 174 41.4
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 5.5e-11 72.0 208 36.5
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 1.2e-10 70.9 203 36.5
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 6.1e-10 68.6 212 34.9
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 8.0e-10 68.2 198 38.9
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.4e-09 67.4 71 50.7
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 3.0e-09 66.2 188 32.4
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 4.0e-09 65.9 145 37.9
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 6.8e-09 65.1 201 34.8
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 6.8e-09 65.1 110 47.3
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 1.2e-08 64.3 204 35.3
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 2.0e-08 63.5 191 33.5
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 2.0e-08 63.5 50 56.0
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 2.6e-08 63.2 109 46.8
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 4.4e-08 62.4 160 41.9
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 5.7e-08 62.0 204 34.8
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 4.8e-07 58.9 80 47.5
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 6.3e-07 58.5 152 49.3
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 6.3e-07 58.5 150 34.7
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 8.3e-07 58.2 191 39.8
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.1e-06 57.8 181 33.1
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 1.8e-06 57.0 149 45.6
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 7.0e-06 55.1 95 44.2


User provided reference genes

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