Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G191100 Manihot esculenta HOM05D008278 ORTHO05D009926 3.0e-22 108.2 47 100.0
Thecc.04G277500 Theobroma cacao HOM05D008278 ORTHO05D009926 6.9e-11 70.5 64 59.4
Glyma.13G215100 Glycine max HOM05D008278 ORTHO05D009926 3.4e-10 68.2 57 57.9
Psat0s1883g0120 Pisum sativum HOM05D008278 ORTHO05D009926 1.7e-09 65.9 35 77.1
vmacro08204 Vaccinium macrocarpon HOM05D008278 ORTHO05D009926 1.7e-09 65.9 51 62.7
CiPaw.02G086800 Carya illinoinensis HOM05D008278 ORTHO05D009926 5.0e-09 64.3 66 50.0
COL.COLO4_13930 Corchorus olitorius HOM05D008278 ORTHO05D009926 6.5e-09 63.9 67 50.7
Dinv04275 Davidia involucrata HOM05D008278 ORTHO05D009926 8.4e-09 63.5 53 60.4
Lj1g0017232 Lotus japonicus HOM05D008278 ORTHO05D009926 1.4e-08 62.8 38 68.4
Aqoxy5G00615 Aquilegia oxysepala HOM05D008278 ORTHO05D009926 2.5e-08 62.0 57 54.4
LjContig00389g0012701 Lotus japonicus HOM05D008278 ORTHO05D009926 4.2e-08 61.2 45 62.2
CiPaw.08G100100 Carya illinoinensis HOM05D008278 ORTHO05D009926 9.3e-08 60.1 31 77.4
Duzib138G1619 Durio zibethinus HOM05D008278 ORTHO05D009926 9.3e-08 60.1 45 64.4
Actinidia21077 Actinidia chinensis HOM05D008278 ORTHO05D009926 1.2e-07 59.7 36 66.7
Eucgr.H03768 Eucalyptus grandis HOM05D008278 ORTHO05D009926 2.1e-07 58.9 73 43.8
VMungo0540G1378 Vigna mungo HOM05D008278 ORTHO05D009926 2.7e-07 58.5 55 54.5
CSS0040059 Camellia sinensis var. sinensis HOM05D008278 ORTHO05D009926 3.5e-07 58.2 57 54.4
CiPaw.07G100700 Carya illinoinensis HOM05D008278 ORTHO05D009926 3.5e-07 58.2 31 74.2
Psat3g024600 Pisum sativum HOM05D008278 ORTHO05D009926 6.1e-07 57.4 72 45.8
Cc03_g02370 Coffea canephora HOM05D008278 ORTHO05D009926 7.9e-07 57.0 45 62.2
Duzib151G0456 Durio zibethinus HOM05D008278 ORTHO05D009926 7.9e-07 57.0 79 38.0
Glyma.03G209200 Glycine max HOM05D008278 ORTHO05D009926 7.9e-07 57.0 34 70.6
Thecc.01G291200 Theobroma cacao HOM05D008278 ORTHO05D009926 7.9e-07 57.0 31 71.0
Actinidia24853 Actinidia chinensis HOM05D008278 ORTHO05D009926 1.3e-06 56.2 33 63.6
Gohir.A11G117700 Gossypium hirsutum HOM05D008278 ORTHO05D009926 1.3e-06 56.2 35 65.7
Gohir.D11G122600 Gossypium hirsutum HOM05D008278 ORTHO05D009926 1.3e-06 56.2 35 65.7
Gorai.007G131400 Gossypium raimondii HOM05D008278 ORTHO05D009926 1.3e-06 56.2 35 65.7
QL03p001140 Quercus lobata HOM05D010912 ORTHO05D009926 1.3e-06 56.2 37 62.2
COL.COLO4_08021 Corchorus olitorius HOM05D008278 ORTHO05D009926 1.8e-06 55.8 37 64.9
COL.COLO4_13623 Corchorus olitorius HOM05D008278 ORTHO05D009926 3.0e-06 55.1 52 53.8
Medtr7g108080 Medicago truncatula HOM05D008278 ORTHO05D009926 3.9e-06 54.7 42 64.3
PGR119G0374 Punica granatum HOM05D008278 ORTHO05D009926 5.1e-06 54.3 34 61.8
Thecc.05G292500 Theobroma cacao HOM05D008278 ORTHO05D009926 5.1e-06 54.3 43 58.1
TWI09G1464 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 5.1e-06 54.3 50 54.0
Manes.01G214200 Manihot esculenta HOM05D008278 ORTHO05D009926 6.7e-06 53.9 41 63.4


User provided reference genes

Program Settings