Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 1.2e-203 713.0 364 100.0
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 3.5e-147 525.4 362 75.7
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 4.3e-105 385.6 361 59.8
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 9.3e-100 367.9 362 57.5
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 6.0e-99 365.2 347 60.5
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 2.8e-96 356.3 348 56.9
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.7e-96 355.9 357 55.5
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.8e-95 353.6 356 55.3
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 9.0e-95 351.3 345 57.7
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 1.2e-94 350.9 365 54.8
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 6.4e-93 345.1 357 54.3
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 8.4e-93 344.7 364 53.6
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 8.7e-90 334.7 343 53.6
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 4.0e-87 325.9 355 55.5
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 3.2e-84 316.2 417 46.0
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.8e-82 310.5 364 52.2
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 3.0e-82 309.7 345 52.2
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 9.7e-81 304.7 356 51.4
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.3e-80 304.3 310 54.5
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.1e-79 301.2 224 73.7
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 7.7e-78 295.0 346 50.3
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 1.7e-77 293.9 361 47.1
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 3.0e-74 283.1 399 45.9
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 4.3e-73 279.3 305 51.5
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.4e-68 264.2 349 47.0
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.2e-68 262.7 347 48.7
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 5.5e-68 262.3 351 45.9
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.5e-68 262.3 351 45.9
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 9.4e-68 261.5 342 46.8
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.9e-67 258.5 351 45.6
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.4e-66 257.7 333 46.8
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 3.0e-66 256.5 233 60.1
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 3.0e-66 256.5 348 45.7
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 3.9e-66 256.1 351 45.3
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.5e-65 254.2 349 45.0
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 4.4e-65 252.7 334 45.2
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.7e-65 252.3 303 49.5
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 7.4e-65 251.9 364 45.1
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 3.7e-64 249.6 310 49.7
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.3e-61 241.1 291 48.8
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 2.2e-61 240.4 346 42.8
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 1.1e-60 238.0 171 74.3
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 2.5e-60 236.9 379 40.9
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 5.5e-60 235.7 347 43.2
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 5.5e-60 235.7 351 43.6
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 5.5e-60 235.7 350 43.4
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 9.4e-60 235.0 342 43.6
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.2e-59 234.6 387 39.0
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.6e-59 234.2 348 43.7
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 3.6e-59 233.0 361 41.8
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 2.3e-58 230.3 353 41.6
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 8.8e-58 228.4 350 42.3
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 2.6e-57 226.9 343 42.0
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 5.7e-57 225.7 356 41.0
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 1.3e-56 224.6 328 43.0
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 2.2e-56 223.8 325 42.2
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.3e-53 214.5 356 42.1
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 2.2e-53 213.8 347 40.9
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 3.8e-53 213.0 358 39.9
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.1e-52 211.5 350 41.1
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 9.4e-52 208.4 332 42.5
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 8.0e-51 205.3 361 39.3
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 6.8e-50 202.2 410 36.8
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 8.8e-50 201.8 320 41.2
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.2e-49 201.4 408 36.8
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 6.3e-48 195.7 326 40.8
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 1.1e-47 194.9 305 42.0
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 2.0e-46 190.7 156 63.5
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 2.7e-46 190.3 329 40.7
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.5e-46 189.5 351 38.5
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 2.5e-44 183.7 154 60.4
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 5.5e-44 182.6 351 37.9
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 6.1e-43 179.1 373 37.8
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.0e-42 176.8 128 69.5
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 4.9e-40 169.5 289 38.8
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.2e-38 164.9 353 33.7
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 2.7e-38 163.7 163 54.0
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 3.3e-36 156.8 335 36.1
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 7.2e-36 155.6 288 38.9
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 2.1e-35 154.1 305 38.0
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 7.5e-33 145.6 310 37.4
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 1.3e-32 144.8 93 77.4
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 4.9e-24 116.3 364 31.6
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.1e-20 105.1 177 40.7
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 1.5e-20 104.8 344 28.5
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 1.8e-18 97.8 147 42.2
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 4.9e-16 89.7 83 57.8
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 1.9e-15 87.8 173 37.6
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 2.7e-14 84.0 72 63.9
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 1.2e-11 75.1 113 40.7
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 6.2e-11 72.8 156 37.2
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 1.1e-10 72.0 220 30.5
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 1.1e-07 62.0 56 60.7
CBR_g38889 Chara braunii HOM05D007369 ORTHO05D009369 3.5e-06 57.0 70 40.0


User provided reference genes

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