Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.2e-40 169.5 87 100.0
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 4.1e-30 134.4 86 73.3
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 1.2e-29 132.9 88 75.0
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 2.1e-29 132.1 78 80.8
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 2.7e-29 131.7 87 73.6
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 1.3e-28 129.4 86 70.9
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.3e-28 128.6 86 73.3
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 5.1e-28 127.5 88 69.3
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.1e-27 126.3 80 77.5
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.9e-27 125.6 90 68.9
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.5e-27 125.2 90 68.9
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 2.5e-27 125.2 85 68.2
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 3.3e-27 124.8 90 67.8
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.3e-27 124.8 90 67.8
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 4.3e-27 124.4 91 71.4
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 5.6e-27 124.0 78 75.6
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 5.6e-27 124.0 91 71.4
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.6e-26 122.5 88 69.3
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 1.6e-26 122.5 87 70.1
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.1e-26 122.1 90 65.6
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.1e-26 122.1 88 69.3
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.1e-26 122.1 88 69.3
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 2.1e-26 122.1 91 68.1
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.8e-26 121.7 91 65.9
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 2.8e-26 121.7 90 66.7
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 6.2e-26 120.6 85 69.4
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 1.1e-25 119.8 77 71.4
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 1.4e-25 119.4 77 72.7
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 1.4e-25 119.4 88 68.2
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.8e-25 119.0 88 64.8
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.2e-24 116.3 88 65.9
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 2.0e-24 115.5 85 64.7
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 3.4e-24 114.8 83 65.1
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 4.4e-24 114.4 87 62.1
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 7.5e-24 113.6 84 61.9
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 7.5e-24 113.6 87 62.1
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 9.9e-24 113.2 91 62.6
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 9.9e-24 113.2 83 63.9
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 1.3e-23 112.8 85 64.7
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.7e-23 112.5 84 61.9
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 1.7e-23 112.5 85 63.5
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 2.2e-23 112.1 75 66.7
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 2.9e-23 111.7 90 61.1
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 2.9e-23 111.7 75 66.7
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 4.9e-23 110.9 75 66.7
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 4.9e-23 110.9 80 63.8
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 4.9e-23 110.9 85 62.4
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 6.4e-23 110.5 90 61.1
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 6.4e-23 110.5 87 60.9
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 8.3e-23 110.2 89 64.0
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 8.3e-23 110.2 89 61.8
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 8.3e-23 110.2 91 60.4
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 1.4e-22 109.4 85 61.2
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 1.4e-22 109.4 87 62.1
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 1.9e-22 109.0 89 60.7
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 2.4e-22 108.6 85 61.2
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 2.4e-22 108.6 85 61.2
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 2.4e-22 108.6 87 63.2
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 3.2e-22 108.2 85 61.2
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 3.2e-22 108.2 73 67.1
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 5.4e-22 107.5 83 61.4
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 7.1e-22 107.1 85 61.2
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.2e-21 106.3 84 58.3
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.6e-21 105.9 75 66.7
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 2.7e-21 105.1 91 54.9
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 3.5e-21 104.8 84 58.3
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 6.0e-21 104.0 82 65.9
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 1.0e-20 103.2 85 60.0
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 1.0e-20 103.2 78 60.3
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.3e-20 102.8 80 61.2
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.3e-20 102.8 85 58.8
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 1.7e-20 102.4 79 62.0
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 6.6e-20 100.5 79 59.5
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 8.6e-20 100.1 79 59.5
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 1.9e-19 99.0 89 57.3
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 5.6e-19 97.4 72 61.1
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 2.1e-18 95.5 99 50.5
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 2.1e-18 95.5 80 56.2
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 2.8e-18 95.1 72 62.5
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 4.7e-18 94.4 72 61.1
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 4.7e-18 94.4 57 75.4
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.1e-17 93.2 69 62.3
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 1.5e-16 89.4 78 53.8
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 1.3e-15 86.3 65 61.5
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 1.9e-14 82.4 75 57.3
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 4.3e-11 71.2 49 69.4
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 8.1e-10 67.0 50 64.0
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.6e-08 62.0 69 46.4
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 2.6e-08 62.0 55 49.1
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 7.6e-08 60.5 44 61.4
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 9.3e-06 53.5 41 58.5


User provided reference genes

Program Settings