Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 2.9e-108 395.6 256 100.0
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 5.1e-36 155.6 159 56.0
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 1.0e-28 131.3 171 48.5
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 1.3e-28 131.0 124 58.9
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 1.3e-28 131.0 171 48.5
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 3.3e-27 126.3 171 46.8
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 5.8e-24 115.5 174 43.1
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 5.8e-24 115.5 174 43.1
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 1.3e-23 114.4 96 60.4
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 2.2e-23 113.6 132 47.0
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 2.2e-23 113.6 167 42.5
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 3.8e-23 112.8 123 52.8
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 8.4e-23 111.7 109 53.2
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 8.4e-23 111.7 151 45.7
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 4.2e-22 109.4 171 39.8
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 4.2e-22 109.4 139 48.9
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 1.6e-21 107.5 123 43.9
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 2.7e-21 106.7 142 45.1
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 1.8e-20 104.0 177 41.2
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 3.0e-20 103.2 173 39.9
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 3.9e-20 102.8 162 43.8
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 3.9e-20 102.8 107 52.3
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 3.9e-20 102.8 185 38.4
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 5.1e-20 102.4 181 39.8
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 5.1e-20 102.4 142 42.3
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 6.7e-20 102.1 162 38.9
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 1.1e-19 101.3 161 42.2
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 1.5e-19 100.9 177 39.5
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 2.5e-19 100.1 152 40.1
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 2.5e-19 100.1 175 37.7
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 5.7e-19 99.0 171 38.0
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 7.4e-19 98.6 173 38.7
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 9.7e-19 98.2 163 40.5
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 1.6e-18 97.4 169 39.1
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 2.2e-18 97.1 107 45.8
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 2.2e-18 97.1 154 44.2
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 2.8e-18 96.7 169 40.2
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 2.8e-18 96.7 169 40.2
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 2.8e-18 96.7 102 52.0
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.8e-18 96.7 123 43.9
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 3.7e-18 96.3 179 38.5
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 3.7e-18 96.3 199 36.2
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 3.7e-18 96.3 146 39.7
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 4.8e-18 95.9 171 37.4
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 4.8e-18 95.9 138 42.0
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 4.8e-18 95.9 138 42.0
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 4.8e-18 95.9 126 44.4
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 4.8e-18 95.9 114 45.6
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 1.1e-17 94.7 100 49.0
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 1.4e-17 94.4 168 37.5
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 1.8e-17 94.0 106 47.2
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 2.4e-17 93.6 170 40.0
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 2.4e-17 93.6 120 40.8
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 2.4e-17 93.6 166 37.3
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 3.1e-17 93.2 165 37.6
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 3.1e-17 93.2 131 40.5
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 3.1e-17 93.2 148 37.2
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 5.3e-17 92.4 170 40.0
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 5.3e-17 92.4 109 45.9
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 6.9e-17 92.0 103 46.6
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 6.9e-17 92.0 107 43.0
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 6.9e-17 92.0 164 37.8
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 9.0e-17 91.7 170 38.2
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 1.2e-16 91.3 154 40.9
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 1.2e-16 91.3 118 43.2
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 1.5e-16 90.9 158 37.3
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 2.6e-16 90.1 169 37.9
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 2.6e-16 90.1 150 40.0
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 4.5e-16 89.4 164 37.8
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 4.5e-16 89.4 170 38.8
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 4.5e-16 89.4 119 42.9
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 5.9e-16 89.0 127 40.2
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 7.7e-16 88.6 123 43.9
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.0e-15 88.2 170 38.8
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 1.3e-15 87.8 73 53.4
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 1.3e-15 87.8 150 39.3
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 3.8e-15 86.3 135 37.8
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 3.8e-15 86.3 151 39.1
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 6.5e-15 85.5 115 40.9
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 8.5e-15 85.1 161 34.8
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 1.1e-14 84.7 95 47.4
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 1.1e-14 84.7 133 40.6
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 1.4e-14 84.3 132 42.4
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 3.2e-14 83.2 100 48.0
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 4.2e-14 82.8 94 42.6
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 9.4e-14 81.6 143 39.9
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 1.2e-13 81.3 127 42.5
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 1.4e-12 77.8 114 43.0
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 2.3e-12 77.0 100 45.0
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 2.5e-11 73.6 87 47.1
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 7.4e-11 72.0 98 40.8
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 9.7e-11 71.6 141 30.5
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 1.7e-10 70.9 150 30.0
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 3.1e-09 66.6 168 32.7
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 6.9e-09 65.5 142 34.5
ATR0665G366 Amborella trichopoda HOM05D007411 ORTHO05D009025 1.3e-07 61.2 166 32.5


User provided reference genes

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