Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.5e-253 879.0 427 100.0
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.3e-177 626.7 436 70.0
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 1.9e-176 622.9 433 68.8
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.5e-173 613.2 427 70.5
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 2.5e-173 612.5 435 68.5
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 2.4e-171 605.9 433 66.5
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.0e-170 602.8 432 67.8
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 8.5e-169 597.4 432 68.1
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.9e-168 596.3 432 65.5
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 1.9e-168 596.3 441 69.4
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.2e-167 593.6 434 67.7
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 1.2e-167 593.6 437 65.9
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.6e-167 593.2 437 65.9
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 2.1e-167 592.8 435 66.4
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 3.6e-167 592.0 434 68.9
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 3.9e-166 588.6 426 66.9
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 8.8e-166 587.4 434 66.4
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 1.1e-165 587.0 441 68.3
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 4.3e-165 585.1 395 71.1
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.2e-164 582.8 432 66.2
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 6.3e-164 581.3 434 65.9
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 8.2e-164 580.9 433 64.2
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 3.1e-163 578.9 389 72.5
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 1.0e-161 573.9 432 65.0
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.7e-161 573.2 430 66.0
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 1.9e-160 569.7 433 63.3
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.9e-160 569.7 419 64.9
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.2e-159 567.0 433 63.0
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.2e-159 567.0 432 64.8
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 2.7e-159 565.8 431 65.4
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 2.7e-159 565.8 432 62.7
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 3.6e-159 565.5 435 65.5
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 3.6e-159 565.5 433 63.0
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 3.6e-159 565.5 432 65.3
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 1.5e-157 560.1 430 63.0
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.6e-157 559.3 426 62.7
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.3e-157 558.9 430 63.0
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.8e-156 555.8 433 63.7
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 4.8e-156 555.1 434 62.7
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.8e-155 553.1 435 62.3
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.8e-155 553.1 435 62.3
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 2.4e-155 552.7 431 63.8
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 2.6e-154 549.3 448 62.5
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.9e-152 543.1 421 63.7
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 3.2e-152 542.3 433 61.9
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.2e-151 540.4 459 61.4
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 6.7e-150 534.6 426 62.4
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.1e-149 533.9 408 64.7
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.0e-149 533.1 426 61.7
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.8e-147 526.6 426 61.7
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 2.4e-147 526.2 411 62.0
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 7.0e-147 524.6 430 59.8
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.0e-146 523.1 436 59.2
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 2.0e-146 523.1 392 65.6
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 1.0e-145 520.8 419 62.1
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.5e-144 516.2 436 58.5
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 9.4e-144 514.2 431 58.7
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 9.4e-144 514.2 427 60.7
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.2e-143 513.8 430 60.0
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.1e-143 513.1 436 58.3
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 2.1e-143 513.1 427 60.4
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 2.7e-143 512.7 436 59.6
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 5.2e-142 508.4 430 60.2
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 7.5e-141 504.6 433 58.2
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 2.2e-140 503.1 431 59.9
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 3.1e-139 499.2 420 59.8
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 5.3e-139 498.4 410 59.3
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 2.1e-135 486.5 518 50.2
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 2.7e-135 486.1 409 59.2
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 8.0e-135 484.6 428 55.4
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.5e-133 480.3 421 58.2
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 4.4e-133 478.8 436 57.8
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 5.7e-133 478.4 418 56.7
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 1.7e-132 476.9 433 55.9
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 2.2e-132 476.5 418 57.4
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 4.5e-130 468.8 373 61.7
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 4.5e-130 468.8 364 62.9
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 2.9e-129 466.1 407 56.3
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 2.9e-129 466.1 407 56.3
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 5.0e-129 465.3 415 55.4
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 6.6e-129 464.9 417 55.2
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 6.6e-129 464.9 405 56.0
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 6.6e-129 464.9 359 62.7
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 4.2e-128 462.2 421 55.3
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 5.5e-128 461.8 405 55.6
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.6e-127 460.3 417 54.4
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 5.2e-126 455.3 418 55.0
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.2e-124 449.9 364 59.1
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 6.3e-124 448.4 661 40.1
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 3.5e-122 442.6 369 58.8
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 7.3e-120 434.9 417 53.7
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.7e-113 413.7 413 51.3
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 6.2e-111 405.2 306 62.4
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 6.8e-110 401.7 308 64.0
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 4.9e-108 395.6 414 49.0
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.5e-88 330.9 291 59.1
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 3.8e-76 289.7 432 40.5
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.6e-74 284.3 277 55.6
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.8e-70 270.8 235 60.0
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 3.2e-67 260.0 448 37.7
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 4.0e-62 243.0 184 63.6
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 3.1e-54 216.9 213 49.8
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 6.9e-54 215.7 215 48.4
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.8e-49 201.1 187 51.3
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.9e-49 199.9 146 61.6
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 6.1e-42 176.0 180 52.2
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.5e-40 171.4 123 65.0
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 2.0e-40 171.0 113 67.3
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 3.1e-38 163.7 244 41.0
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 6.1e-26 122.9 102 56.9
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.0e-17 95.5 101 50.5
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 5.2e-17 93.2 104 44.2
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.5e-16 89.4 72 58.3
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 7.0e-14 82.8 98 46.9
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 6.1e-10 69.7 50 66.0
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.2e-08 65.5 226 26.1
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 1.3e-07 62.0 225 27.6


User provided reference genes

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