Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 2.2e-111 405.6 202 100.0
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 7.5e-67 257.7 196 73.0
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 3.6e-53 212.2 196 59.7
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 6.0e-48 194.9 167 60.5
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 3.0e-47 192.6 175 61.1
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 9.6e-46 187.6 198 55.1
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 1.9e-38 163.3 192 51.0
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 2.4e-36 156.4 170 54.7
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 6.9e-36 154.8 200 46.0
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 4.6e-32 142.1 207 46.9
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 1.5e-30 137.1 205 45.4
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 9.6e-30 134.4 202 46.5
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 3.6e-29 132.5 204 47.1
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.2e-27 127.5 195 42.1
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.0e-27 126.7 205 41.0
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.6e-27 126.3 195 41.5
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 2.2e-26 123.2 200 39.5
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 1.4e-25 120.6 172 43.0
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 2.4e-25 119.8 194 43.8
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 5.4e-25 118.6 205 40.5
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 7.1e-25 118.2 188 42.0
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 3.5e-24 115.9 155 45.8
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 1.5e-22 110.5 196 41.3
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 2.5e-22 109.8 196 40.8
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 9.6e-22 107.8 170 41.2
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 9.6e-22 107.8 171 41.5
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 5.8e-19 98.6 175 40.6
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 6.5e-18 95.1 179 39.1
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 1.4e-17 94.0 154 38.3
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 1.4e-17 94.0 196 35.2
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 2.5e-17 93.2 204 34.8
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 2.5e-17 93.2 119 50.4
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 3.2e-17 92.8 200 36.0
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 5.5e-17 92.0 170 40.0
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 6.0e-16 88.6 141 37.6
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 6.0e-16 88.6 148 37.2
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 7.9e-16 88.2 193 33.2
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.8e-15 87.0 122 45.9
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.3e-15 86.7 98 51.0
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 1.9e-14 83.6 202 33.7
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 2.5e-14 83.2 166 37.3
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 7.4e-14 81.6 151 35.1
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 1.3e-13 80.9 197 33.5
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 1.3e-13 80.9 197 33.5
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 6.2e-13 78.6 138 35.5
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 1.8e-12 77.0 168 35.1
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 1.8e-12 77.0 222 30.2
COL.COLO4_15964 Corchorus olitorius HOM05D008157 ORTHO05D009575 2.4e-12 76.6 147 38.8
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.0e-11 73.6 86 51.2
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 2.0e-11 73.6 142 38.0
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 1.7e-10 70.5 130 36.9
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 1.7e-10 70.5 139 36.0
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 2.9e-10 69.7 122 36.9
AL7G32040 Arabidopsis lyrata HOM05D012000 ORTHO05D013959 8.4e-10 68.2 144 36.1
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.4e-09 67.4 124 36.3
FvH4_2g20360 Fragaria vesca HOM05D017729 ORTHO05D022643 1.9e-09 67.0 192 35.4
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.5e-09 66.6 203 28.1
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 4.2e-09 65.9 182 31.3
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 5.5e-09 65.5 148 31.8
AT4G21865 Arabidopsis thaliana HOM05D012000 ORTHO05D013959 9.3e-09 64.7 144 34.7
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 9.3e-09 64.7 137 33.6
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 1.2e-08 64.3 130 34.6
Psat6g131320 Pisum sativum HOM05D012468 ORTHO05D009575 1.2e-08 64.3 239 28.0
Medtr1g073260 Medicago truncatula HOM05D012468 ORTHO05D009575 2.1e-08 63.5 98 42.9
Ca_09800_v3 Cicer arietinum L. HOM05D012468 ORTHO05D009575 2.7e-08 63.2 232 27.2
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 2.7e-08 63.2 178 29.8
Lalb_Chr06g0169531 Lupinus albus HOM05D012468 ORTHO05D009575 3.5e-08 62.8 160 32.5
arahy.Tifrunner.gnm1.ann1.JW933S Arachis hypogaea HOM05D012468 ORTHO05D009575 4.6e-08 62.4 119 37.8
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 4.6e-08 62.4 200 29.0
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.3e-07 60.8 123 35.0
FAN27G2614 Fragaria x ananassa HOM05D017729 ORTHO05D022643 1.8e-07 60.5 143 35.7
FAN24G1650 Fragaria x ananassa HOM05D017729 ORTHO05D022643 2.3e-07 60.1 152 37.5
Sp7g20010 Schrenkiella parvula HOM05D012000 ORTHO05D013959 3.0e-07 59.7 145 37.2
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 3.9e-07 59.3 77 42.9
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 8.7e-07 58.2 90 40.0
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 8.7e-07 58.2 156 29.5
Thhalv10026480m.g Eutrema salsugineum HOM05D012000 ORTHO05D013959 1.1e-06 57.8 121 37.2
FAN17G2184 Fragaria x ananassa HOM05D008157 ORTHO05D009575 1.1e-06 57.8 112 38.4
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.1e-06 57.8 123 34.1
arahy.Tifrunner.gnm1.ann1.U79AWX Arachis hypogaea HOM05D012468 ORTHO05D009575 2.5e-06 56.6 141 34.0
CARHR228620 Cardamine hirsuta HOM05D012000 ORTHO05D013959 2.5e-06 56.6 169 31.4
BcaB03g11715 Brassica carinata HOM05D012000 ORTHO05D013959 5.7e-06 55.5 92 42.4
CANSAT01G2859 Cannabis sativa HOM05D017729 ORTHO05D009575 7.4e-06 55.1 94 34.0
Carub.0007s1951 Capsella rubella HOM05D012000 ORTHO05D013959 7.4e-06 55.1 147 34.7


User provided reference genes

Program Settings