Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.1e-143 511.9 285 100.0
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.2e-78 297.4 233 72.1
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 2.1e-78 296.6 250 67.6
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 5.3e-74 282.0 233 70.8
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.7e-72 276.9 249 64.3
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 9.0e-66 254.6 234 62.8
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 7.1e-55 218.4 229 55.0
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 3.5e-54 216.1 229 59.8
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 4.6e-54 215.7 221 62.0
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.3e-53 214.2 207 57.0
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 2.3e-53 213.4 209 59.3
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 3.9e-53 212.6 203 59.6
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 8.7e-53 211.5 209 56.5
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 8.7e-53 211.5 203 59.1
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.5e-52 210.7 253 50.6
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 3.3e-52 209.5 210 56.2
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 4.3e-52 209.1 243 51.9
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 8.2e-51 204.9 210 55.7
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.4e-50 204.1 239 53.6
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 1.8e-50 203.8 211 59.2
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 1.8e-50 203.8 212 55.7
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.1e-50 203.0 239 53.1
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 5.3e-50 202.2 210 54.8
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 6.9e-50 201.8 240 53.8
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 9.0e-50 201.4 227 52.4
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 9.0e-50 201.4 221 60.2
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.2e-49 201.1 240 53.8
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.2e-49 201.1 239 52.7
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.6e-49 199.9 214 55.1
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 2.6e-49 199.9 239 52.7
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 3.8e-48 196.1 211 55.9
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 4.9e-48 195.7 228 53.9
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 2.5e-47 193.4 203 53.7
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 2.5e-47 193.4 272 50.4
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 2.5e-47 193.4 211 52.1
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 3.2e-47 193.0 205 52.7
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 6.0e-46 188.7 258 51.2
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.3e-45 187.6 199 53.3
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.3e-45 187.6 220 49.5
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 3.9e-45 186.0 210 49.0
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 5.1e-45 185.7 230 49.6
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 5.1e-45 185.7 207 49.3
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 8.7e-45 184.9 241 50.2
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 2.5e-44 183.3 220 50.5
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 4.3e-44 182.6 206 55.3
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 9.7e-44 181.4 208 57.2
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.6e-43 180.6 185 54.1
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.8e-43 179.9 233 48.1
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 4.8e-43 179.1 212 57.5
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 8.2e-43 178.3 220 51.4
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 1.1e-42 177.9 196 53.6
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 1.4e-42 177.6 183 57.4
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.4e-42 177.6 211 52.6
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 2.4e-42 176.8 212 51.9
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.4e-42 176.8 273 45.8
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 2.0e-41 173.7 208 50.0
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 2.0e-41 173.7 214 50.9
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.3e-40 171.0 209 51.7
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.3e-40 171.0 210 51.9
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 5.0e-40 169.1 222 45.0
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 5.0e-40 169.1 207 49.3
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 5.0e-40 169.1 232 46.1
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.4e-39 167.5 198 52.5
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.4e-39 167.5 211 47.9
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.2e-39 166.0 222 44.6
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 2.7e-38 163.3 209 45.5
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 2.7e-38 163.3 213 44.6
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 6.1e-38 162.2 194 49.5
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 6.1e-38 162.2 208 48.1
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 3.0e-37 159.8 194 49.5
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.5e-36 157.5 206 51.9
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 7.4e-36 155.2 230 47.4
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.4e-34 151.0 205 43.4
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.4e-34 151.0 202 46.5
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 3.1e-34 149.8 167 58.7
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 4.1e-34 149.4 224 43.8
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 5.3e-34 149.1 227 44.1
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 5.3e-34 149.1 194 55.2
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.2e-33 147.9 208 40.9
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 1.5e-33 147.5 206 52.9
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 2.6e-33 146.7 126 66.7
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 5.9e-33 145.6 202 47.5
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 1.9e-31 140.6 180 47.2
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 7.2e-31 138.7 194 43.8
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 1.2e-30 137.9 220 43.2
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.6e-30 137.5 209 43.5
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 3.6e-30 136.3 211 45.5
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 3.6e-30 136.3 206 45.6
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.6e-28 130.2 108 63.0
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.7e-27 127.5 170 45.3
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 4.8e-27 125.9 211 39.3
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 5.9e-25 119.0 176 44.3
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 7.7e-25 118.6 165 48.5
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.7e-24 117.5 172 50.0
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.9e-24 116.7 205 42.9
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 3.2e-23 113.2 122 51.6
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 3.6e-22 109.8 164 43.3
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.0e-21 108.2 168 45.2
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 1.8e-21 107.5 210 37.6
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 1.8e-21 107.5 210 37.6
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 5.2e-21 105.9 180 41.1
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 6.7e-21 105.5 90 61.1
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 1.1e-20 104.8 210 37.1
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 1.5e-20 104.4 182 44.5
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.5e-20 104.4 182 42.3
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 2.6e-20 103.6 193 42.5
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 2.6e-20 103.6 193 42.5
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 2.6e-20 103.6 193 42.5
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 3.3e-20 103.2 195 40.0
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 5.7e-20 102.4 198 41.9
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 5.7e-20 102.4 198 40.4
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 7.4e-20 102.1 99 56.6
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 7.4e-20 102.1 210 36.7
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 9.7e-20 101.7 215 36.7
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 4.8e-19 99.4 171 43.9
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.4e-18 97.8 182 40.1
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.4e-18 97.8 179 40.2
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.6e-17 93.6 180 39.4
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 3.5e-17 93.2 158 44.3
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.3e-16 91.3 175 40.0
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 2.9e-16 90.1 113 46.9
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.9e-16 90.1 135 48.9
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 5.0e-16 89.4 113 46.0
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 6.5e-16 89.0 121 46.3
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.1e-15 88.2 227 39.2
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 2.5e-15 87.0 203 32.5
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 9.4e-15 85.1 197 38.1
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.2e-14 84.7 189 34.9
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 5.2e-13 79.3 123 39.8
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 4.5e-09 66.2 132 44.7
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 5.0e-08 62.8 125 34.4


User provided reference genes

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