Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 3.4e-138 495.0 244 100.0
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 1.9e-56 223.4 240 51.2
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 1.6e-55 220.3 243 50.2
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 4.7e-55 218.8 275 49.8
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 1.4e-54 217.2 243 49.0
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 5.2e-54 215.3 246 52.8
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 1.2e-53 214.2 281 48.4
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 5.9e-50 201.8 266 47.0
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 7.7e-50 201.4 245 49.0
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 7.2e-48 194.9 244 47.1
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 2.1e-47 193.4 244 49.2
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 2.7e-47 193.0 255 46.3
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 1.8e-46 190.3 245 48.6
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 5.4e-43 178.7 243 46.5
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 2.0e-42 176.8 247 46.6
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 1.7e-41 173.7 250 47.2
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 5.0e-41 172.2 250 46.4
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 4.2e-40 169.1 250 46.8
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 7.2e-40 168.3 177 52.5
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 1.2e-39 167.5 246 42.3
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 1.6e-39 167.2 256 43.0
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 2.1e-39 166.8 252 44.0
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 2.8e-39 166.4 252 44.0
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 2.8e-39 166.4 250 42.4
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 8.0e-39 164.9 257 46.3
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 3.0e-38 162.9 245 43.3
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 6.8e-38 161.8 243 43.2
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 9.8e-37 157.9 251 43.4
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 4.9e-36 155.6 241 41.9
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 6.3e-36 155.2 257 43.2
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 1.1e-35 154.5 242 41.7
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 3.1e-35 152.9 246 40.2
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 3.1e-35 152.9 251 41.8
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 2.7e-34 149.8 243 42.8
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 1.0e-33 147.9 236 41.5
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 2.3e-33 146.7 240 41.2
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 2.9e-33 146.4 253 40.3
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 5.0e-33 145.6 237 40.9
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 6.6e-33 145.2 247 40.1
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 1.9e-32 143.7 265 38.1
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 1.9e-32 143.7 237 42.2
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 2.5e-32 143.3 236 40.3
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 4.3e-32 142.5 245 40.8
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 5.6e-32 142.1 246 37.8
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 1.6e-31 140.6 242 38.0
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 1.4e-30 137.5 248 40.3
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 1.8e-30 137.1 243 38.7
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 2.3e-30 136.7 240 40.4
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 3.1e-30 136.3 249 41.0
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 3.1e-30 136.3 289 35.3
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 1.2e-29 134.4 241 39.0
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 2.6e-29 133.3 242 38.0
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 4.4e-29 132.5 246 39.0
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 9.8e-29 131.3 286 33.2
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 1.3e-28 131.0 266 36.8
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 3.7e-28 129.4 232 40.9
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 6.4e-28 128.6 257 36.6
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 8.3e-28 128.3 258 34.9
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 1.1e-27 127.9 238 37.4
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 1.2e-26 124.4 180 41.7
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 2.0e-26 123.6 259 36.7
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 2.7e-26 123.2 250 37.6
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 3.5e-26 122.9 254 35.8
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 6.0e-26 122.1 258 38.4
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 1.0e-25 121.3 256 36.7
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 1.7e-25 120.6 251 37.1
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 3.9e-25 119.4 262 37.8
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 5.0e-25 119.0 273 35.2
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 1.1e-24 117.9 244 36.1
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 3.3e-24 116.3 254 37.8
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 4.3e-24 115.9 258 36.0
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 1.6e-23 114.0 253 35.2
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 8.0e-23 111.7 251 33.1
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.1e-22 111.3 228 36.0
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 2.6e-21 106.7 255 36.9
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 3.4e-21 106.3 76 57.9
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 4.4e-21 105.9 245 35.1
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 7.5e-21 105.1 256 35.9
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 4.1e-19 99.4 252 33.7
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 1.6e-18 97.4 245 30.6
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 7.8e-18 95.1 247 33.2
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 1.3e-17 94.4 84 58.3
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 2.3e-17 93.6 271 30.3
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 5.1e-17 92.4 81 51.9
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.9e-16 90.5 194 40.2
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 5.6e-16 89.0 114 42.1
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 5.6e-16 89.0 139 39.6
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 1.6e-15 87.4 73 53.4
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 6.2e-15 85.5 73 52.1
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 8.1e-15 85.1 211 35.5
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 6.8e-14 82.0 166 39.8
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 1.2e-13 81.3 153 39.2
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 5.8e-13 79.0 178 31.5
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 9.9e-13 78.2 85 48.2
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 4.9e-12 75.9 154 37.0
Pp3c2_23160 Physcomitrium patens HOM05D007349 ORTHO05D009317 2.7e-10 70.1 125 35.2
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 5.1e-09 65.9 37 67.6
Peaxi162Scf00938g00313 Petunia axillaris HOM05D007349 ORTHO05D009317 3.6e-07 59.7 110 38.2
Glyma.20G197900 Glycine max HOM05D007349 ORTHO05D009317 3.1e-06 56.6 121 39.7
Sopen00g011340 Solanum pennellii HOM05D007349 ORTHO05D009317 4.0e-06 56.2 113 35.4


User provided reference genes

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