Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G145577 Manihot esculenta HOM05D000003 ORTHO05D000004 1.1e-55 219.5 102 100.0
Manes.10G084550 Manihot esculenta HOM05D000003 ORTHO05D000004 3.0e-16 88.6 102 42.2
Manes.11G132650 Manihot esculenta HOM05D000003 ORTHO05D000004 2.7e-12 75.5 95 36.8
Atru.chr10.1987 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-12 73.9 101 39.6
Atru.chr12.2342 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-10 68.6 102 36.3
CANSAT78G0786 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-10 67.8 99 36.4
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-10 67.0 101 37.6
CANSAT21G1369 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-09 66.2 98 35.7
CANSAT25G2443 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-09 66.2 99 36.4
CANSAT56G4406 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-09 65.9 99 34.3
CANSAT01G2388 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-09 65.1 99 36.4
Atru.chr10.1274 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-09 64.7 105 36.2
Manes.08G042350 Manihot esculenta HOM05D000003 ORTHO05D000004 4.7e-09 64.7 93 36.6
Atru.chr13.1582 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-09 64.3 101 38.6
Atru.chr13.1818 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-09 64.3 102 37.3
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-09 64.3 101 39.6
Atru.ctg24.6 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-09 64.3 102 38.2
Atru.chr10.527 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 63.5 99 37.4
Atru.chr6.710 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 63.5 102 35.3
Atru.chr2.678 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-08 63.2 101 38.6
Atru.chr5.1622 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-08 63.2 99 37.4
Atru.chr5.2450 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-08 63.2 99 37.4
CANSAT25G3451 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-08 62.8 101 36.6
Atru.chr1.1693 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-08 62.4 102 34.3
Atru.chr9.813 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-08 62.4 103 37.9
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 2.3e-08 62.4 100 33.0
CANSAT54G0625 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-08 62.0 99 35.4
FvH4_5g04240 Fragaria vesca HOM05D000003 ORTHO05D000004 3.1e-08 62.0 99 31.3
Atru.chr9.913 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-08 61.6 107 33.6
CANSAT64G2222 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-08 61.6 99 37.4
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-08 61.2 103 35.9
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 5.2e-08 61.2 105 37.1
Atru.chr4.252 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-08 61.2 103 36.9
MD08G1205700 Malus domestica HOM05D000003 ORTHO05D000004 5.2e-08 61.2 99 32.3
Atru.chr8.816 Acer truncatum HOM05D000003 ORTHO05D000004 8.9e-08 60.5 102 29.4
Prupe.6G123900 Prunus persica HOM05D000003 ORTHO05D000004 8.9e-08 60.5 101 36.6
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.9e-08 60.5 102 32.4
Atru.chr11.920 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.1 99 38.4
Atru.chr6.788 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.1 101 37.6
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-07 59.7 101 30.7
Atru.chr4.50 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-07 59.7 99 38.4
FvH4_4g08194 Fragaria vesca HOM05D000003 ORTHO05D000004 1.5e-07 59.7 99 30.3
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 1.5e-07 59.7 99 30.3
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-07 59.7 99 30.3
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-07 59.3 103 35.9
Atru.chr12.2026 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-07 59.3 101 37.6
CANSAT78G1794 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-07 59.3 100 32.0
Atru.chr11.155 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-07 58.9 99 38.4
CANSAT21G1036 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-07 58.5 99 30.3
Prupe.4G011200 Prunus persica HOM05D000003 ORTHO05D000004 4.4e-07 58.2 101 35.6
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 5.8e-07 57.8 101 35.6
CANSAT21G0879 Cannabis sativa HOM05D000003 ORTHO05D000004 5.8e-07 57.8 99 30.3
CANSAT54G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 5.8e-07 57.8 99 31.3
Atru.chr5.3359 Acer truncatum HOM05D000003 ORTHO05D000004 7.5e-07 57.4 101 34.7
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 7.5e-07 57.4 102 36.3
Atru.chr1.2568 Acer truncatum HOM05D000003 ORTHO05D000004 9.8e-07 57.0 104 35.6
Atru.chr2.2049 Acer truncatum HOM05D000003 ORTHO05D000004 9.8e-07 57.0 101 36.6
CANSAT21G2476 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-07 57.0 99 34.3
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 9.8e-07 57.0 99 33.3
Atru.chr12.2514 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 56.6 101 34.7
Atru.chr7.591 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 56.6 102 31.4
CANSAT21G2477 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 56.6 99 34.3
CANSAT56G3747 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-06 56.6 99 35.4
Nn5g30285 Nelumbo nucifera HOM05D000003 ORTHO05D000004 1.3e-06 56.6 98 34.7
Rhsim01G0072400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-06 56.6 97 26.8
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-06 56.6 98 29.6
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.3e-06 56.6 101 32.7
Atru.chr11.1423 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.2 101 34.7
FvH4_4g09142 Fragaria vesca HOM05D000003 ORTHO05D000004 1.7e-06 56.2 100 29.0
Rhsim05G0208700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-06 56.2 99 29.3
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-06 56.2 98 29.6
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.7e-06 56.2 98 32.7
Atru.chr10.778 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 101 32.7
Atru.chr3.1567 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 99 37.4
Atru.chr3.1587 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 99 37.4
Atru.chr4.1426 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 103 32.0
Atru.chr5.2472 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 104 37.5
Aa31LG11G5960 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 103 33.0
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-06 55.8 102 33.3
Atru.chr8.1143 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 102 33.3
CANSAT35G1604 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-06 55.5 99 33.3
CANSAT80G2134 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-06 55.5 99 32.3
RcHm_v2.0_Chr7g0182091 Rosa chinensis HOM05D000003 ORTHO05D000004 2.9e-06 55.5 99 32.3
Sed0010093 Sechium edule HOM05D000003 ORTHO05D000004 2.9e-06 55.5 106 32.1
CANSAT35G1518 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-06 55.1 102 33.3
CANSAT78G0646 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-06 55.1 101 36.6
QL12p023981 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-06 55.1 98 28.6
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.7e-06 55.1 99 30.3
Atru.chr12.2439 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 107 35.5
Atru.chr8.1026 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 101 33.7
CANSAT64G0477 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-06 54.7 103 31.1
AUR62026917 Chenopodium quinoa HOM05D000003 ORTHO05D000004 4.9e-06 54.7 98 27.6
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-06 54.7 103 30.1
CANSAT21G2489 Cannabis sativa HOM05D000003 ORTHO05D000004 6.4e-06 54.3 99 30.3
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 6.4e-06 54.3 103 29.1
Atru.chr1.2596 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-06 53.9 104 36.5
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-06 53.9 99 27.3
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 8.3e-06 53.9 103 33.0
CANSAT78G2184 Cannabis sativa HOM05D000003 ORTHO05D000004 8.3e-06 53.9 99 29.3
Rhsim04G0060300 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.3e-06 53.9 99 28.3
Sed0016145 Sechium edule HOM05D000003 ORTHO05D000004 8.3e-06 53.9 99 26.3
TPR.G37077 Trifolium pratense HOM05D000003 ORTHO05D000004 8.3e-06 53.9 100 30.0


User provided reference genes

Program Settings