Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 5.6e-99 364.4 200 100.0
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 7.7e-56 221.1 202 65.8
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 2.2e-55 219.5 200 68.5
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 3.8e-55 218.8 209 63.2
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.9e-54 216.5 199 66.3
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.6e-53 213.4 206 63.6
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 8.0e-53 211.1 210 62.9
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 1.4e-52 210.3 202 64.9
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.4e-52 210.3 204 65.2
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 3.0e-52 209.1 221 60.2
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.5e-51 206.8 200 61.5
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.3e-50 203.8 219 59.8
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.2e-50 203.0 205 63.9
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.2e-50 203.0 205 62.9
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 6.3e-50 201.4 207 61.4
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 8.3e-50 201.1 204 59.8
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 4.1e-49 198.7 205 62.9
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 2.3e-47 193.0 215 58.6
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 2.9e-47 192.6 207 60.9
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 1.9e-46 189.9 201 61.7
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-46 189.9 221 57.9
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-46 189.9 221 57.9
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-46 189.9 211 59.7
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-46 189.9 211 59.7
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 5.5e-46 188.3 228 57.9
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 9.5e-46 187.6 221 57.5
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 2.1e-45 186.4 208 61.1
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 2.1e-45 186.4 209 57.4
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 8.0e-45 184.5 216 57.9
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.4e-44 183.7 212 58.0
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.0e-43 179.9 211 57.8
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 4.4e-43 178.7 210 59.0
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 1.3e-42 177.2 215 58.1
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.8e-42 176.0 189 59.3
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 6.3e-42 174.9 214 54.7
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.2e-40 170.6 217 53.0
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 4.5e-40 168.7 143 74.1
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 6.6e-39 164.9 205 51.2
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 5.6e-38 161.8 195 52.8
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 7.3e-38 161.4 200 53.5
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 1.2e-37 160.6 201 54.7
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 2.1e-37 159.8 195 54.9
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.1e-37 159.8 196 54.6
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 2.8e-37 159.5 200 51.5
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.4e-36 157.1 199 55.8
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 2.3e-36 156.4 217 52.5
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 3.0e-36 156.0 201 53.2
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 4.0e-36 155.6 201 51.7
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 4.0e-36 155.6 200 53.5
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 5.2e-36 155.2 221 48.0
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 5.2e-36 155.2 197 54.3
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 8.9e-36 154.5 193 53.4
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.2e-35 154.1 210 50.5
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.5e-35 153.7 213 49.8
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 1.7e-34 150.2 193 51.8
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.7e-34 150.2 191 55.5
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.4e-33 147.1 195 51.3
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.8e-33 146.7 200 51.5
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 3.2e-33 146.0 202 48.0
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 4.1e-33 145.6 192 52.6
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 4.1e-33 145.6 193 51.3
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 7.0e-33 144.8 184 54.3
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 2.7e-32 142.9 189 52.4
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 2.7e-32 142.9 202 49.5
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 3.5e-32 142.5 214 50.0
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.3e-31 139.8 205 49.8
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 5.0e-31 138.7 189 49.2
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 5.0e-31 138.7 202 46.5
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 8.0e-29 131.3 196 50.0
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.4e-28 130.6 175 51.4
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 3.1e-28 129.4 209 48.3
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 4.0e-28 129.0 244 43.0
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.2e-27 127.5 141 56.7
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 2.0e-27 126.7 197 46.7
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.9e-26 122.9 107 64.5
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 4.9e-26 122.1 187 47.6
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 4.9e-26 122.1 234 43.6
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 6.4e-26 121.7 182 47.8
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 1.9e-25 120.2 189 47.1
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.9e-25 120.2 193 46.6
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 4.1e-25 119.0 175 48.0
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 9.2e-25 117.9 200 45.5
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 4.6e-24 115.5 193 44.0
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 1.7e-23 113.6 185 45.4
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 5.6e-22 108.6 210 41.9
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 7.3e-22 108.2 108 57.4
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 9.5e-22 107.8 207 39.1
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 2.1e-21 106.7 189 43.9
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.1e-20 104.4 154 46.1
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 6.8e-20 101.7 200 40.0
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.0e-19 100.1 191 42.4
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 3.4e-19 99.4 160 48.8
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 2.7e-16 89.7 149 40.9
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.4e-09 66.6 173 35.8
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 6.0e-08 62.0 176 35.8
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 5.1e-07 58.9 64 48.4


User provided reference genes

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