Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G123600 Manihot esculenta HOM05D006536 ORTHO05D005877 3.7e-73 278.1 139 100.0
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 7.6e-18 94.4 146 39.0
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 2.9e-17 92.4 145 39.3
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 2.4e-16 89.4 139 38.1
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 7.1e-16 87.8 145 36.6
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.2e-15 87.0 143 33.6
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 2.3e-14 82.8 132 35.6
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 2.3e-14 82.8 147 38.1
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 3.9e-14 82.0 132 36.4
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 5.1e-14 81.6 136 36.0
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 4.3e-13 78.6 123 35.0
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 5.6e-13 78.2 138 34.8
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 5.6e-13 78.2 140 33.6
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 9.6e-13 77.4 137 32.8
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.1e-12 74.3 152 33.6
COL.COLO4_15402 Corchorus olitorius HOM05D006536 ORTHO05D005877 1.8e-11 73.2 143 35.7
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.1e-11 72.4 152 32.2
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.0e-11 72.0 156 31.4
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.3e-11 71.6 144 31.9
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 6.9e-11 71.2 109 39.4
Potri.011G134600 Populus trichocarpa HOM05D006536 ORTHO05D005877 6.9e-11 71.2 136 33.1
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 9.0e-11 70.9 144 38.2
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.5e-10 70.1 161 30.4
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 2.0e-10 69.7 165 30.3
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 2.0e-10 69.7 142 28.9
CAN.G981.17 Capsicum annuum HOM05D006536 ORTHO05D005877 2.6e-10 69.3 141 30.5
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.6e-10 69.3 152 30.9
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 3.4e-10 68.9 107 40.2
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 3.4e-10 68.9 150 30.0
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.4e-10 68.6 152 31.6
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.4e-10 68.6 152 31.6
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.4e-10 68.6 152 31.6
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.8e-10 68.2 155 29.0
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 7.6e-10 67.8 142 28.2
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.3e-09 67.0 157 29.3
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.7e-09 66.6 145 30.3
Gorai.009G426600 Gossypium raimondii HOM05D015826 ORTHO05D005877 2.2e-09 66.2 143 37.8
Manes.03G123501 Manihot esculenta HOM05D006536 ORTHO05D005877 2.2e-09 66.2 150 32.7
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-09 66.2 146 31.5
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-09 66.2 124 31.5
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 2.9e-09 65.9 142 31.0
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.9e-09 65.9 147 33.3
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 2.9e-09 65.9 143 30.1
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 3.8e-09 65.5 140 34.3
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 4.9e-09 65.1 154 29.9
Gohir.A01G075200 Gossypium hirsutum HOM05D015826 ORTHO05D005877 6.4e-09 64.7 142 31.0
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 8.4e-09 64.3 148 31.8
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.1e-08 63.9 144 30.6
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.1e-08 63.9 147 30.6
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 1.9e-08 63.2 102 35.3
Gohir.D01G062500 Gossypium hirsutum HOM05D015826 ORTHO05D005877 2.4e-08 62.8 138 31.2
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 2.4e-08 62.8 146 30.8
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.4e-08 62.8 142 30.3
COL.COLO4_09580 Corchorus olitorius HOM05D015826 ORTHO05D005877 3.2e-08 62.4 139 28.1
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 3.2e-08 62.4 144 31.2
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 4.2e-08 62.0 144 31.9
Gorai.002G083200 Gossypium raimondii HOM05D015826 ORTHO05D005877 4.2e-08 62.0 138 31.2
Oeu022218.1 Olea europaea HOM05D006536 ORTHO05D005877 5.4e-08 61.6 150 29.3
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 5.4e-08 61.6 117 31.6
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 7.1e-08 61.2 89 33.7
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 9.3e-08 60.8 147 30.6
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 9.3e-08 60.8 99 34.3
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 1.6e-07 60.1 137 27.0
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.6e-07 60.1 145 31.7
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.6e-07 60.1 150 28.7
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 2.1e-07 59.7 91 34.1
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 2.1e-07 59.7 145 31.0
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 2.1e-07 59.7 142 26.1
Gohir.A04G021300 Gossypium hirsutum HOM05D015826 ORTHO05D005877 3.5e-07 58.9 140 35.0
SalBow3G3753 Salvia bowleyana HOM05D006536 ORTHO05D005877 6.0e-07 58.2 70 41.4
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 6.0e-07 58.2 148 32.4
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 7.9e-07 57.8 142 30.3
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 7.9e-07 57.8 144 31.9
SHI27896 Sapria himalayana HOM05D006536 ORTHO05D005877 1.0e-06 57.4 112 34.8
SHI26699 Sapria himalayana HOM05D006536 ORTHO05D005877 1.3e-06 57.0 112 33.9
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 2.3e-06 56.2 153 29.4
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 2.3e-06 56.2 146 28.8
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 5.1e-06 55.1 143 29.4
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 6.6e-06 54.7 147 31.3
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.6e-06 54.7 110 32.7
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 6.6e-06 54.7 145 30.3
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 8.7e-06 54.3 136 29.4


User provided reference genes

Program Settings