Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 1.9e-187 659.1 341 100.0
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 2.6e-128 462.6 345 71.9
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 2.3e-124 449.5 343 70.6
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 2.8e-122 442.6 345 69.3
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.4e-121 440.3 345 69.0
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 2.4e-118 429.5 344 68.0
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 4.2e-118 428.7 300 73.7
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.2e-117 427.2 329 67.2
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 7.8e-117 424.5 348 66.4
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.7e-116 423.3 326 67.2
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 5.1e-116 421.8 349 65.3
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 6.6e-116 421.4 348 67.2
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 8.7e-116 421.0 281 75.8
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 1.9e-115 419.9 343 65.9
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 5.6e-115 418.3 348 66.4
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 4.8e-114 415.2 338 64.5
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.4e-113 412.9 344 65.1
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 3.1e-113 412.5 320 68.4
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 4.0e-113 412.1 282 70.9
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 4.0e-113 412.1 282 70.9
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 5.3e-113 411.8 343 66.2
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 5.3e-113 411.8 340 64.1
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 2.0e-112 409.8 303 70.3
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 5.8e-112 408.3 282 72.3
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 1.3e-111 407.1 324 66.4
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.3e-111 407.1 340 63.5
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.3e-111 407.1 286 71.0
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.4e-110 403.7 340 62.9
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.9e-110 403.3 280 73.9
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 4.2e-110 402.1 285 70.5
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 9.3e-110 401.0 343 62.1
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.1e-109 399.8 282 72.7
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 2.7e-109 399.4 346 62.7
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 4.6e-109 398.7 291 70.8
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 6.0e-109 398.3 326 65.0
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 1.7e-108 396.7 299 66.9
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 3.9e-108 395.6 282 72.0
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 1.5e-107 393.7 323 62.8
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 7.4e-107 391.3 347 63.1
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 4.8e-106 388.7 321 62.0
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 8.1e-106 387.9 343 63.8
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 1.1e-105 387.5 289 68.5
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.4e-105 387.1 340 62.4
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 9.0e-105 384.4 341 60.1
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 9.0e-105 384.4 341 62.2
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 1.5e-104 383.6 341 60.1
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 1.5e-104 383.6 328 62.2
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 2.6e-104 382.9 340 62.4
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 7.6e-104 381.3 320 63.8
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 7.6e-104 381.3 340 61.2
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 9.9e-104 380.9 341 61.0
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 4.9e-103 378.6 298 65.1
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.4e-102 377.1 324 61.4
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 3.2e-102 375.9 306 64.1
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 4.2e-102 375.6 344 59.0
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 2.1e-101 373.2 350 59.1
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 3.5e-101 372.5 346 58.7
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 4.6e-101 372.1 271 73.1
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 1.3e-100 370.5 282 67.0
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.8e-100 370.2 323 61.3
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 3.0e-100 369.4 349 57.6
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 5.1e-100 368.6 317 61.8
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 3.3e-99 365.9 286 66.8
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 3.3e-99 365.9 353 57.8
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 9.6e-99 364.4 344 56.7
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 4.0e-97 359.0 348 58.9
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 1.5e-96 357.1 299 61.5
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.9e-95 352.8 286 64.0
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 7.9e-93 344.7 339 57.8
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 1.0e-92 344.4 275 62.2
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 4.8e-90 335.5 313 58.5
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 8.2e-90 334.7 314 57.3
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 1.4e-89 334.0 314 57.6
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.4e-89 334.0 282 61.0
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 2.4e-89 333.2 316 58.5
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 5.3e-89 332.0 290 61.7
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 5.3e-89 332.0 290 61.7
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 6.9e-89 331.6 289 62.3
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 9.0e-89 331.3 289 61.9
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 1.0e-87 327.8 282 62.8
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 1.0e-87 327.8 278 62.2
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.9e-86 323.6 319 59.6
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 9.3e-86 321.2 351 53.3
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 2.3e-84 316.6 307 59.0
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 5.1e-84 315.5 350 52.9
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 6.5e-79 298.5 320 54.7
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 1.1e-78 297.7 294 56.5
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 3.9e-76 289.3 269 55.0
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 5.7e-75 285.4 203 70.0
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 2.8e-66 256.5 279 48.4
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 3.6e-61 239.6 308 45.8
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 3.0e-60 236.5 183 61.7
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 8.2e-58 228.4 214 57.9
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 4.0e-52 209.5 132 75.0
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 2.0e-51 207.2 267 42.3
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 3.8e-47 193.0 120 73.3
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 2.0e-32 144.1 284 35.6
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 7.8e-32 142.1 264 32.2
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 1.9e-30 137.5 247 41.7
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 9.5e-30 135.2 114 61.4
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 3.1e-28 130.2 183 47.5
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 8.9e-28 128.6 134 49.3
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 2.1e-21 107.5 114 49.1
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.2e-19 101.7 270 28.1
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 5.2e-12 76.3 104 39.4
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 2.0e-11 74.3 325 24.6


User provided reference genes

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