Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 4.2e-132 474.9 282 100.0
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 1.2e-83 313.9 288 65.6
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 1.6e-83 313.5 288 66.7
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 1.8e-82 310.1 291 62.5
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 2.7e-78 296.2 249 69.5
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 8.6e-77 291.2 247 67.2
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 7.2e-76 288.1 246 67.9
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 3.6e-75 285.8 242 64.0
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 4.7e-75 285.4 244 67.2
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 1.0e-74 284.3 284 57.4
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 6.8e-74 281.6 243 65.0
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 6.8e-74 281.6 259 64.1
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 6.8e-74 281.6 285 63.2
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 1.2e-73 280.8 247 65.2
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 2.6e-73 279.6 280 61.8
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 7.5e-73 278.1 224 73.7
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 4.9e-72 275.4 250 65.2
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 1.1e-71 274.2 242 67.8
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 9.2e-71 271.2 249 63.9
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 4.6e-70 268.9 246 63.8
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 4.6e-70 268.9 256 63.7
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 5.9e-70 268.5 242 66.1
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 5.9e-70 268.5 242 64.0
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 1.0e-69 267.7 231 64.1
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 1.3e-69 267.3 235 65.5
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 1.7e-69 266.9 242 63.6
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 1.1e-68 264.2 248 63.7
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 1.1e-68 264.2 251 64.5
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 3.3e-68 262.7 263 59.3
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 1.2e-67 260.8 250 64.4
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 4.7e-67 258.8 194 71.6
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 4.7e-67 258.8 249 63.1
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 8.0e-67 258.1 252 64.3
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 1.4e-66 257.3 221 66.5
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 1.8e-66 256.9 206 71.4
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.3e-66 256.5 240 64.6
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 3.1e-66 256.1 250 64.0
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 4.0e-66 255.8 206 70.9
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 4.0e-66 255.8 249 63.1
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 5.2e-66 255.4 234 65.8
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 6.8e-66 255.0 285 58.2
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 8.9e-66 254.6 240 62.9
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 8.9e-66 254.6 217 68.7
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 8.9e-66 254.6 251 60.6
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 2.6e-65 253.1 237 63.7
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 2.6e-65 253.1 242 62.0
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 4.4e-65 252.3 243 63.4
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 4.4e-65 252.3 234 62.0
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 4.4e-65 252.3 251 59.8
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 7.5e-65 251.5 230 61.7
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.3e-64 250.8 238 62.6
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.3e-64 250.8 238 62.6
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.3e-64 250.8 246 63.0
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.7e-64 250.4 236 64.8
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 2.9e-64 249.6 237 63.7
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 4.9e-64 248.8 236 63.6
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 4.9e-64 248.8 249 61.0
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.9e-64 248.8 279 59.9
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 6.4e-64 248.4 226 67.7
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 6.4e-64 248.4 273 60.1
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 6.4e-64 248.4 201 70.1
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 8.3e-64 248.1 206 65.5
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 1.4e-63 247.3 273 59.7
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 2.4e-63 246.5 289 55.4
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 4.1e-63 245.7 244 62.3
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 4.1e-63 245.7 226 62.8
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 5.4e-63 245.4 179 74.3
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.6e-62 243.8 232 63.8
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 5.0e-61 238.8 243 60.1
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 5.0e-61 238.8 243 60.1
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 5.0e-61 238.8 253 59.3
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 8.6e-61 238.0 243 60.5
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 2.5e-60 236.5 257 59.1
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 4.3e-60 235.7 189 68.8
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 7.3e-60 235.0 243 60.5
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 9.5e-60 234.6 239 60.3
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 9.5e-60 234.6 235 60.0
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 9.5e-60 234.6 247 58.3
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 1.6e-59 233.8 256 62.9
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 2.1e-59 233.4 205 67.3
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 2.8e-59 233.0 189 68.3
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 3.6e-59 232.6 191 66.5
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 6.2e-59 231.9 243 60.1
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 6.2e-59 231.9 232 58.2
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 1.7e-56 223.8 199 66.8
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 2.9e-56 223.0 194 63.9
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 1.9e-55 220.3 249 56.6
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 3.2e-55 219.5 241 55.6
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.5e-52 210.7 222 58.1
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 1.9e-52 210.3 170 65.9
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 1.9e-52 210.3 170 65.9
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.3e-52 209.1 222 58.1
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 4.3e-52 209.1 207 62.3
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 7.3e-52 208.4 222 57.7
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 1.2e-49 201.1 204 58.3
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 2.0e-49 200.3 248 54.8
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 1.3e-48 197.6 198 58.1
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 3.6e-43 179.5 290 44.1
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 6.2e-43 178.7 240 51.7
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 8.1e-43 178.3 250 48.8
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 1.1e-42 177.9 195 59.0
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 2.0e-41 173.7 250 47.6
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 3.4e-41 172.9 239 50.6
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 4.4e-41 172.6 117 75.2
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 8.7e-37 158.3 221 48.4
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 1.9e-36 157.1 149 63.1
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 9.6e-36 154.8 253 43.5
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 3.6e-35 152.9 253 43.9
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 2.4e-34 150.2 135 64.4
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 3.1e-34 149.8 142 62.7
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 6.4e-32 142.1 187 48.1
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 8.4e-32 141.7 168 52.4
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 8.4e-32 141.7 167 50.9
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 3.9e-29 132.9 165 53.9
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 3.9e-29 132.9 165 53.9
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 1.1e-28 131.3 133 60.9
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 1.5e-28 131.0 163 56.4
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 9.6e-28 128.3 102 68.6
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 3.1e-26 123.2 114 61.4
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 2.6e-25 120.2 185 43.8
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 7.6e-25 118.6 166 44.0
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 2.4e-23 113.6 197 44.7
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 3.0e-21 106.7 196 42.3
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 4.3e-20 102.8 98 56.1
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 1.1e-18 98.2 74 73.0
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 5.8e-17 92.4 71 73.2
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 7.1e-15 85.5 164 39.6
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 2.7e-14 83.6 156 33.3
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 6.0e-14 82.4 132 41.7
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 6.7e-13 79.0 56 76.8
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 3.1e-10 70.1 60 61.7
Lsat_1_v5_gn_5_140640 Lactuca sativa HOM05D005433 ORTHO05D006675 5.0e-08 62.8 44 65.9
TAR629G0034 Trochodendron aralioides HOM05D005433 ORTHO05D006675 1.1e-07 61.6 40 77.5
Actinidia09909 Actinidia chinensis HOM05D005433 ORTHO05D006675 1.9e-07 60.8 42 73.8
PRCOL_00001575 Prasinoderma coloniale HOM05D005433 ORTHO05D006675 5.5e-07 59.3 172 33.1
C01p49410 Brassica napus HOM05D005433 ORTHO05D040690 7.2e-07 58.9 107 43.0
CARHR090070 Cardamine hirsuta HOM05D005433 ORTHO05D006675 7.9e-06 55.5 32 78.1


User provided reference genes

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