Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G083162 Manihot esculenta HOM05D020154 ORTHO05D003404 5.6e-81 304.3 162 100.0
Manes.03G082200 Manihot esculenta HOM05D020154 ORTHO05D003404 3.5e-51 205.3 161 67.7
Manes.08G115700 Manihot esculenta HOM05D001445 ORTHO05D003404 5.7e-25 118.2 164 43.9
Manes.08G115800 Manihot esculenta HOM05D001445 ORTHO05D003404 9.7e-25 117.5 164 43.3
Manes.09G173500 Manihot esculenta HOM05D003556 ORTHO05D003404 1.4e-18 97.1 157 38.9
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 2.7e-14 82.8 166 34.3
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 1.0e-13 80.9 172 33.7
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 1.1e-12 77.4 166 35.5
Cfa014665 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.9e-12 76.6 167 32.9
QL03p019550 Quercus lobata HOM05D003556 ORTHO05D003404 2.5e-12 76.3 165 35.8
Cfa006646 Carpinus fangiana HOM05D003556 ORTHO05D003404 3.2e-12 75.9 171 34.5
Cfa014668 Carpinus fangiana HOM05D003556 ORTHO05D003404 5.5e-12 75.1 166 31.9
Cfa006647 Carpinus fangiana HOM05D003556 ORTHO05D003404 7.2e-12 74.7 166 33.7
Cfa006645 Carpinus fangiana HOM05D014310 ORTHO05D003404 1.2e-11 73.9 166 31.3
QL03p019019 Quercus lobata HOM05D003556 ORTHO05D003404 1.6e-11 73.6 161 36.6
Haze_04119 Corylus avellana HOM05D014310 ORTHO05D003404 2.1e-11 73.2 160 33.1
QL03p019667 Quercus lobata HOM05D003556 ORTHO05D003404 2.1e-11 73.2 161 36.6
QL03p019662 Quercus lobata HOM05D003556 ORTHO05D003404 2.7e-11 72.8 161 36.6
QL08p042930 Quercus lobata HOM05D003556 ORTHO05D003404 2.7e-11 72.8 161 36.6
Cpa.g.sc48.109 Carica papaya HOM05D003556 ORTHO05D003404 1.0e-10 70.9 158 34.2
Manes.09G171725 Manihot esculenta HOM05D020154 ORTHO05D003404 1.0e-10 70.9 167 30.5
Manes.09G172850 Manihot esculenta HOM05D020154 ORTHO05D003404 1.4e-10 70.5 167 30.5
Manes.09G173066 Manihot esculenta HOM05D020154 ORTHO05D003404 1.4e-10 70.5 167 30.5
Manes.09G173282 Manihot esculenta HOM05D020154 ORTHO05D003404 1.4e-10 70.5 167 30.5
CANSAT56G1763 Cannabis sativa HOM05D001445 ORTHO05D001261 2.3e-10 69.7 146 34.9
CiPaw.07G023600 Carya illinoinensis HOM05D003556 ORTHO05D003404 3.0e-10 69.3 171 31.0
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 2.0e-09 66.6 147 32.7
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 5.7e-09 65.1 146 33.6
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 7.5e-09 64.7 158 31.0
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 7.5e-09 64.7 170 33.5
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 9.8e-09 64.3 170 31.2
Glyma.17G044900 Glycine max HOM05D001445 ORTHO05D003404 2.2e-08 63.2 164 31.1
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 3.7e-08 62.4 175 31.4
Manes.15G002000 Manihot esculenta HOM05D001578 ORTHO05D001207 4.9e-08 62.0 163 32.5
TWI12G1373 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 8.3e-08 61.2 150 28.0
TWI60G0816 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 8.3e-08 61.2 150 28.0
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 1.4e-07 60.5 146 32.9
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 2.4e-07 59.7 166 31.9
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 4.1e-07 58.9 149 28.9
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 9.2e-07 57.8 163 29.4
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 9.2e-07 57.8 175 26.9
Potri.006G134900 Populus trichocarpa HOM05D004113 ORTHO05D003404 9.2e-07 57.8 142 31.0
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 1.2e-06 57.4 153 28.8
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 1.6e-06 57.0 149 27.5
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 1.6e-06 57.0 148 29.1
Potri.008G102600 Populus trichocarpa HOM05D001578 ORTHO05D001207 2.0e-06 56.6 165 29.7
CSS0043898 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 3.5e-06 55.8 154 28.6
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 3.5e-06 55.8 148 31.1
Lalb_Chr11g0066641 Lupinus albus HOM05D001445 ORTHO05D003404 4.5e-06 55.5 119 31.1
EL10Ac1g00256 Beta vulgaris HOM05D001445 ORTHO05D001261 5.9e-06 55.1 124 30.6
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 5.9e-06 55.1 166 27.1
Lalb_Chr07g0181461 Lupinus albus HOM05D001445 ORTHO05D003404 5.9e-06 55.1 119 31.1
VMungo1215G2168 Vigna mungo HOM05D001445 ORTHO05D003404 5.9e-06 55.1 159 28.9
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 7.7e-06 54.7 149 26.2


User provided reference genes

Program Settings