Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 2.5e-50 201.8 104 100.0
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 1.2e-36 156.4 104 73.1
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 4.6e-36 154.5 101 74.3
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 1.5e-34 149.4 105 68.6
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 5.6e-34 147.5 105 66.7
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 3.7e-33 144.8 100 71.0
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 4.8e-33 144.4 100 69.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 6.2e-33 144.1 101 69.3
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 8.1e-33 143.7 101 71.3
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.1e-32 143.3 98 69.4
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 2.4e-32 142.1 85 81.2
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 3.1e-32 141.7 100 69.0
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 4.0e-32 141.4 85 80.0
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 4.0e-32 141.4 102 70.6
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 5.3e-32 141.0 107 65.4
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 6.9e-32 140.6 99 70.7
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 6.9e-32 140.6 100 67.0
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 1.5e-31 139.4 106 64.2
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.5e-31 139.4 86 75.6
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 2.0e-31 139.0 100 67.0
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 2.0e-31 139.0 100 67.0
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 2.6e-31 138.7 84 79.8
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 2.6e-31 138.7 104 63.5
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 4.5e-31 137.9 106 66.0
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 4.5e-31 137.9 106 64.2
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 4.5e-31 137.9 97 68.0
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 4.5e-31 137.9 100 67.0
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.3e-30 136.3 84 76.2
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 1.7e-30 136.0 92 71.7
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 1.7e-30 136.0 99 68.7
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.9e-30 135.2 107 64.5
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 2.9e-30 135.2 100 64.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 2.9e-30 135.2 100 64.0
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.9e-30 135.2 96 64.6
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 2.9e-30 135.2 82 78.0
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 2.9e-30 135.2 84 78.6
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 4.9e-30 134.4 100 65.0
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 6.5e-30 134.0 104 61.5
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 8.4e-30 133.7 97 63.9
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-29 133.3 107 63.6
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.4e-29 132.9 100 66.0
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 1.4e-29 132.9 84 75.0
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 2.5e-29 132.1 84 73.8
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 2.5e-29 132.1 86 76.7
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 5.5e-29 131.0 86 73.3
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 7.1e-29 130.6 85 72.9
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.2e-28 129.8 84 71.4
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 2.7e-28 128.6 84 71.4
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 3.5e-28 128.3 83 69.9
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 3.5e-28 128.3 85 71.8
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 4.6e-28 127.9 100 63.0
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 6.0e-28 127.5 101 60.4
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 6.0e-28 127.5 84 71.4
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 7.9e-28 127.1 84 70.2
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 7.9e-28 127.1 82 74.4
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 1.0e-27 126.7 100 60.0
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 1.3e-27 126.3 85 70.6
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 1.3e-27 126.3 82 70.7
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 1.8e-27 125.9 98 62.2
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 2.3e-27 125.6 101 59.4
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 2.3e-27 125.6 88 64.8
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 3.0e-27 125.2 83 68.7
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 3.9e-27 124.8 82 73.2
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 6.7e-27 124.0 82 73.2
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 8.7e-27 123.6 84 69.0
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.1e-26 123.2 83 68.7
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 1.5e-26 122.9 106 55.7
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 1.9e-26 122.5 100 61.0
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 2.5e-26 122.1 83 68.7
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 3.3e-26 121.7 83 67.5
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 4.3e-26 121.3 104 56.7
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 4.3e-26 121.3 83 68.7
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 4.3e-26 121.3 86 62.8
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 4.3e-26 121.3 83 68.7
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 7.4e-26 120.6 82 72.0
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 9.6e-26 120.2 88 62.5
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 1.3e-25 119.8 91 58.2
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 1.3e-25 119.8 91 58.2
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.3e-25 119.8 91 58.2
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.3e-25 119.8 91 58.2
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 1.3e-25 119.8 91 58.2
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 1.3e-25 119.8 84 63.1
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 1.6e-25 119.4 84 64.3
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.6e-25 119.4 102 55.9
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 2.8e-25 118.6 82 65.9
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 2.8e-25 118.6 82 68.3
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 3.7e-25 118.2 104 55.8
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 4.8e-25 117.9 83 67.5
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 1.8e-24 115.9 83 62.7
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 2.4e-24 115.5 84 59.5
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 3.1e-24 115.2 84 60.7
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 3.1e-24 115.2 104 52.9
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 4.1e-24 114.8 84 60.7
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 6.9e-24 114.0 87 65.5
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 1.2e-23 113.2 81 60.5
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 4.5e-23 111.3 70 75.7
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 1.3e-22 109.8 94 53.2
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.1e-21 106.7 98 54.1
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 3.2e-21 105.1 77 67.5
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 7.2e-21 104.0 80 58.8
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 9.3e-21 103.6 80 58.8
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.0e-19 100.1 83 53.0
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 2.3e-19 99.0 84 54.8
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 6.7e-19 97.4 83 51.8
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 3.3e-18 95.1 104 47.1
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 5.7e-18 94.4 83 54.2
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 5.7e-18 94.4 63 69.8
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 1.8e-16 89.4 81 46.9
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 5.3e-16 87.8 104 43.3
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 6.1e-12 74.3 84 41.7
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 3.0e-11 72.0 84 47.6
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 5.1e-11 71.2 70 47.1
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 1.7e-09 66.2 84 34.5
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 3.1e-08 62.0 80 35.0


User provided reference genes

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