Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 7.6e-62 240.4 123 100.0
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.2e-27 126.7 118 58.5
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 2.3e-26 122.5 119 58.0
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 4.8e-24 114.8 110 59.1
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 6.3e-24 114.4 123 56.9
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 1.8e-23 112.8 123 53.7
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 6.9e-23 110.9 124 54.8
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 1.2e-22 110.2 123 56.1
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 2.6e-22 109.0 124 55.6
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 1.3e-21 106.7 135 52.6
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 2.2e-21 105.9 138 49.3
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 2.9e-21 105.5 136 50.7
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 1.1e-20 103.6 109 55.0
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 1.4e-20 103.2 131 48.9
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 3.2e-20 102.1 79 68.4
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 5.5e-20 101.3 117 54.7
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 7.2e-20 100.9 133 47.4
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 1.6e-19 99.8 116 51.7
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 2.3e-18 95.9 141 46.8
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 1.1e-17 93.6 122 50.0
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 1.1e-17 93.6 115 52.2
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 1.1e-17 93.6 118 47.5
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 1.9e-17 92.8 78 64.1
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 1.9e-17 92.8 88 58.0
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 2.5e-17 92.4 112 54.5
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 3.3e-17 92.0 78 64.1
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 5.7e-17 91.3 114 50.0
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 7.4e-17 90.9 74 64.9
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 2.2e-16 89.4 112 49.1
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 3.7e-16 88.6 112 50.9
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 4.8e-16 88.2 110 50.0
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 6.3e-16 87.8 128 46.9
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 8.2e-16 87.4 93 52.7
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 1.4e-15 86.7 79 60.8
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 1.2e-14 83.6 69 62.3
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 1.5e-14 83.2 86 52.3
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 1.5e-14 83.2 103 50.5
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 1.5e-14 83.2 68 60.3
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 2.6e-14 82.4 73 63.0
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 4.5e-14 81.6 111 45.9
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 4.5e-14 81.6 83 55.4
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 1.0e-13 80.5 111 47.7
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 1.1e-12 77.0 110 45.5
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 1.1e-12 77.0 110 47.3
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 1.4e-12 76.6 121 43.8
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 1.4e-12 76.6 119 42.0
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 1.9e-12 76.3 111 43.2
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 2.5e-12 75.9 115 42.6
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 2.5e-12 75.9 117 42.7
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 4.2e-12 75.1 67 64.2
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 4.2e-12 75.1 110 44.5
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 5.5e-12 74.7 116 43.1
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 7.2e-12 74.3 83 53.0
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 1.6e-11 73.2 109 43.1
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 2.7e-11 72.4 111 44.1
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 2.7e-11 72.4 111 44.1
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 1.0e-10 70.5 111 45.0
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 2.3e-10 69.3 64 56.2
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 5.1e-10 68.2 111 44.1
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 5.1e-10 68.2 111 44.1
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 3.3e-09 65.5 128 37.5
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 7.4e-09 64.3 66 54.5
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 9.7e-09 63.9 71 52.1
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 9.7e-09 63.9 71 52.1
Cpa.g.sc30.141 Carica papaya HOM05D008198 ORTHO05D010220 1.4e-07 60.1 93 45.2
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 4.1e-07 58.5 68 50.0


User provided reference genes

Program Settings