Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G071216 Manihot esculenta HOM05D009368 ORTHO05D000110 1.9e-144 515.8 255 100.0
Manes.11G103350 Manihot esculenta HOM05D009368 ORTHO05D000110 2.6e-93 345.9 229 78.6
Manes.12G096601 Manihot esculenta HOM05D009368 ORTHO05D000110 2.6e-93 345.9 233 77.7
Manes.08G043150 Manihot esculenta HOM05D009368 ORTHO05D000110 2.5e-91 339.3 233 75.5
Manes.06G045650 Manihot esculenta HOM05D009368 ORTHO05D000110 4.2e-91 338.6 229 76.9
Manes.17G120650 Manihot esculenta HOM05D009368 ORTHO05D000110 4.2e-91 338.6 229 76.9
Manes.09G086083 Manihot esculenta HOM05D009368 ORTHO05D000110 1.8e-89 333.2 279 67.7
Manes.12G049491 Manihot esculenta HOM05D009368 ORTHO05D000110 1.1e-86 323.9 258 69.4
Manes.08G086022 Manihot esculenta HOM05D009368 ORTHO05D000110 2.6e-72 276.2 194 74.2
Manes.08G069790 Manihot esculenta HOM05D009368 ORTHO05D000110 3.6e-66 255.8 211 67.3
Manes.05G086382 Manihot esculenta HOM05D009368 ORTHO05D000110 2.3e-65 253.1 211 66.8
Manes.18G126754 Manihot esculenta HOM05D009368 ORTHO05D000110 5.8e-64 248.4 237 61.6
Manes.04G031960 Manihot esculenta HOM05D009368 ORTHO05D000110 4.9e-63 245.4 181 70.7
Manes.03G070956 Manihot esculenta HOM05D009368 ORTHO05D000110 6.4e-63 245.0 180 71.1
Manes.04G059588 Manihot esculenta HOM05D009368 ORTHO05D000110 8.6e-60 234.6 210 64.3
Manes.17G004315 Manihot esculenta HOM05D009368 ORTHO05D000110 2.7e-53 213.0 167 69.5
Manes.12G085416 Manihot esculenta HOM05D009368 ORTHO05D000110 7.8e-45 184.9 145 69.0
Manes.02G219861 Manihot esculenta HOM05D009368 ORTHO05D000110 1.7e-39 167.2 139 64.7
Manes.04G063974 Manihot esculenta HOM05D009368 ORTHO05D000110 4.2e-38 162.5 163 59.5
Manes.11G099901 Manihot esculenta HOM05D009368 ORTHO05D000110 1.0e-36 157.9 134 65.7
Manes.17G025798 Manihot esculenta HOM05D009368 ORTHO05D000110 1.3e-34 151.0 133 63.9
Manes.14G173866 Manihot esculenta HOM05D009368 ORTHO05D000110 4.8e-34 149.1 124 67.7
Manes.11G039864 Manihot esculenta HOM05D009368 ORTHO05D000110 1.8e-33 147.1 121 67.8
Manes.02G212160 Manihot esculenta HOM05D009368 ORTHO05D000110 4.2e-30 136.0 119 64.7
Manes.11G055447 Manihot esculenta HOM05D009368 ORTHO05D000110 2.1e-29 133.7 116 65.5
Manes.04G009534 Manihot esculenta HOM05D009368 ORTHO05D000110 6.2e-26 122.1 68 91.2
Manes.05G138726 Manihot esculenta HOM05D009368 ORTHO05D000110 6.2e-26 122.1 68 91.2
Manes.13G069776 Manihot esculenta HOM05D009368 ORTHO05D000110 6.2e-26 122.1 68 91.2
Manes.02G221140 Manihot esculenta HOM05D009368 ORTHO05D000110 2.4e-25 120.2 68 91.2
Manes.07G093150 Manihot esculenta HOM05D009368 ORTHO05D000110 9.0e-25 118.2 106 63.2
Manes.11G039949 Manihot esculenta HOM05D009368 ORTHO05D000110 9.0e-25 118.2 68 88.2
Manes.13G092670 Manihot esculenta HOM05D009368 ORTHO05D000110 6.4e-23 112.1 98 60.2
Lsat_1_v5_gn_3_5821 Lactuca sativa HOM05D008959 ORTHO05D000110 9.6e-19 98.2 301 25.2
Lsat_1_v5_gn_6_25761 Lactuca sativa HOM05D008959 ORTHO05D000110 9.6e-19 98.2 301 25.2
COL.COLO4_24208 Corchorus olitorius HOM05D016401 ORTHO05D009534 4.8e-18 95.9 188 31.9
Lsat_1_v5_gn_6_44661 Lactuca sativa HOM05D008959 ORTHO05D000110 4.8e-18 95.9 301 24.9
Lsat_1_v5_gn_7_39260 Lactuca sativa HOM05D008959 ORTHO05D000110 4.8e-18 95.9 226 27.4
Lsat_1_v5_gn_7_44701 Lactuca sativa HOM05D008959 ORTHO05D000110 4.8e-18 95.9 301 24.9
Lsat_1_v5_gn_3_2021 Lactuca sativa HOM05D008959 ORTHO05D000110 6.2e-18 95.5 290 24.1
Lsat_1_v5_gn_7_64800 Lactuca sativa HOM05D008959 ORTHO05D000110 6.2e-18 95.5 290 24.1
Lsat_1_v5_gn_1_126560 Lactuca sativa HOM05D008959 ORTHO05D000110 5.3e-17 92.4 262 25.2
TPR.G27572 Trifolium pratense HOM05D013784 ORTHO05D000110 2.0e-16 90.5 212 29.2
Lj3g0001529 Lotus japonicus HOM05D013784 ORTHO05D000110 1.0e-15 88.2 153 34.6
COL.COLO4_25435 Corchorus olitorius HOM05D016401 ORTHO05D025150 2.2e-15 87.0 188 31.4
COL.COLO4_29290 Corchorus olitorius HOM05D016401 ORTHO05D025150 2.2e-15 87.0 188 31.4
Lsat_1_v5_gn_4_47461 Lactuca sativa HOM05D008959 ORTHO05D000110 2.2e-15 87.0 281 23.8
Lsat_1_v5_gn_7_24620 Lactuca sativa HOM05D008959 ORTHO05D000110 6.5e-15 85.5 166 30.7
Psat2g112240 Pisum sativum HOM05D013784 ORTHO05D000110 2.5e-14 83.6 137 35.0
HanXRQChr13g0421391 Helianthus annuus HOM05D008711 ORTHO05D010134 2.3e-12 77.0 133 30.8
COL.COLO4_38106 Corchorus olitorius HOM05D020549 ORTHO05D000110 3.0e-12 76.6 128 35.2
Lsat_1_v5_gn_6_58100 Lactuca sativa HOM05D008959 ORTHO05D000110 3.0e-12 76.6 284 23.9
Oeu064174.1 Olea europaea HOM05D027131 ORTHO05D013900 3.9e-12 76.3 172 30.2
COL.COLO4_24354 Corchorus olitorius HOM05D016401 ORTHO05D000031 8.7e-12 75.1 118 33.9
HanXRQChr15g0469701 Helianthus annuus HOM05D008711 ORTHO05D010134 8.7e-12 75.1 133 30.1
Lsat_1_v5_gn_7_98181 Lactuca sativa HOM05D008959 ORTHO05D000110 1.5e-11 74.3 201 25.9
COL.COLO4_35423 Corchorus olitorius HOM05D020549 ORTHO05D000110 4.3e-11 72.8 203 26.6
Oeu046169.1 Olea europaea HOM05D019573 ORTHO05D016360 1.6e-10 70.9 146 32.9
Hund10167 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.6e-10 70.9 187 27.3
Hund26532 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.6e-10 70.9 187 27.3
COL.COLO4_05846 Corchorus olitorius HOM05D014433 ORTHO05D000110 2.1e-10 70.5 123 32.5
COL.COLO4_29043 Corchorus olitorius HOM05D005763 ORTHO05D005970 2.1e-10 70.5 124 30.6
TPR.G20407 Trifolium pratense HOM05D013784 ORTHO05D000110 2.1e-10 70.5 103 36.9
Lj6g0010933 Lotus japonicus HOM05D000420 ORTHO05D000110 2.8e-10 70.1 129 27.9
Hund18745 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.7e-10 69.7 131 31.3
TPR.G26461 Trifolium pratense HOM05D000420 ORTHO05D000110 6.3e-10 68.9 127 29.1
Hund29656 Selenicereus undatus HOM05D000420 ORTHO05D000110 8.2e-10 68.6 196 27.6
Hund29657 Selenicereus undatus HOM05D000420 ORTHO05D000110 8.2e-10 68.6 196 27.6
COL.COLO4_10333 Corchorus olitorius HOM05D014433 ORTHO05D000110 1.4e-09 67.8 123 31.7
HanXRQChr01g0007361 Helianthus annuus HOM05D008711 ORTHO05D010134 1.8e-09 67.4 133 28.6
Manes.01G045650 Manihot esculenta HOM05D000420 ORTHO05D000110 1.8e-09 67.4 129 31.8
VMungo1215G2822 Vigna mungo HOM05D000420 ORTHO05D000110 3.1e-09 66.6 131 31.3
HanXRQChr03g0064601 Helianthus annuus HOM05D015005 ORTHO05D000110 6.9e-09 65.5 124 26.6
COL.COLO4_04724 Corchorus olitorius HOM05D009620 ORTHO05D010911 9.0e-09 65.1 179 27.4
Phvul.003G242500 Phaseolus vulgaris HOM05D000107 ORTHO05D000110 9.0e-09 65.1 116 34.5
Hund01715 Selenicereus undatus HOM05D001220 ORTHO05D000110 9.0e-09 65.1 188 27.1
Hund07786 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.2e-08 64.7 130 29.2
Psat0s2980g0240 Pisum sativum HOM05D000420 ORTHO05D000110 1.5e-08 64.3 127 29.1
COL.COLO4_10047 Corchorus olitorius HOM05D014433 ORTHO05D000110 2.0e-08 63.9 123 31.7
COL.COLO4_26729 Corchorus olitorius HOM05D019361 ORTHO05D000110 2.0e-08 63.9 137 29.9
Hund11083 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.4e-08 63.2 129 29.5
COL.COLO4_24605 Corchorus olitorius HOM05D019361 ORTHO05D000110 4.5e-08 62.8 215 23.3
Lsat_1_v5_gn_3_96041 Lactuca sativa HOM05D008959 ORTHO05D000110 5.8e-08 62.4 144 26.4
Hund03626 Selenicereus undatus HOM05D000420 ORTHO05D000110 5.8e-08 62.4 187 25.7
Potri.007G036901 Populus trichocarpa HOM05D008959 ORTHO05D000110 1.0e-07 61.6 222 23.4
Hund13276 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.0e-07 61.6 128 30.5
Hund20082 Selenicereus undatus HOM05D001220 ORTHO05D000110 1.0e-07 61.6 122 31.1
VMungo0251G0010 Vigna mungo HOM05D034162 ORTHO05D000110 1.0e-07 61.6 109 33.9
Oeu027634.1 Olea europaea HOM05D019573 ORTHO05D016360 1.3e-07 61.2 74 41.9
Hund24269 Selenicereus undatus HOM05D001220 ORTHO05D000110 2.2e-07 60.5 151 28.5
COL.COLO4_06007 Corchorus olitorius HOM05D009620 ORTHO05D010911 2.9e-07 60.1 126 29.4
HanXRQChr05g0161201 Helianthus annuus HOM05D015005 ORTHO05D000110 2.9e-07 60.1 123 26.0
Hund22827 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.9e-07 60.1 127 29.9
COL.COLO4_24437 Corchorus olitorius HOM05D009620 ORTHO05D010911 3.8e-07 59.7 125 28.8
COL.COLO4_32130 Corchorus olitorius HOM05D020549 ORTHO05D000110 3.8e-07 59.7 79 39.2
Hund11157 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-07 59.7 188 26.1
Hund13504 Selenicereus undatus HOM05D009125 ORTHO05D000110 6.5e-07 58.9 107 32.7
Hund24249 Selenicereus undatus HOM05D001220 ORTHO05D000110 6.5e-07 58.9 129 30.2
HanXRQChr11g0337131 Helianthus annuus HOM05D015005 ORTHO05D000110 8.4e-07 58.5 102 25.5
HanXRQChr14g0443171 Helianthus annuus HOM05D015005 ORTHO05D000110 8.4e-07 58.5 155 25.8
Hund19802 Selenicereus undatus HOM05D009125 ORTHO05D000110 8.4e-07 58.5 107 32.7
TWI36G1173 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 1.4e-06 57.8 126 27.0
Phvul.003G117500 Phaseolus vulgaris HOM05D001220 ORTHO05D000110 1.9e-06 57.4 127 29.1
Hund19567 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.9e-06 57.4 162 27.2
Hund27513 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.9e-06 57.4 162 27.2
TWI53G0463 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 2.5e-06 57.0 126 26.2
COL.COLO4_07240 Corchorus olitorius HOM05D009620 ORTHO05D010911 3.2e-06 56.6 125 28.0
Peaxi162Scf00074g00127 Petunia axillaris HOM05D001220 ORTHO05D000110 3.2e-06 56.6 117 29.9
Hund04723 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.2e-06 56.6 128 27.3
Hund22591 Selenicereus undatus HOM05D009125 ORTHO05D000110 3.2e-06 56.6 107 31.8
TWI79G1588 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 3.2e-06 56.6 126 26.2
Hund22816 Selenicereus undatus HOM05D000420 ORTHO05D000110 4.2e-06 56.2 129 28.7
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 7.2e-06 55.5 126 27.8
Nitab4.5_0000023g0140 Nicotiana tabacum HOM05D000420 ORTHO05D000110 9.3e-06 55.1 127 26.8
Hund08331 Selenicereus undatus HOM05D001220 ORTHO05D000110 9.3e-06 55.1 107 32.7


User provided reference genes

Program Settings