Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G070956 Manihot esculenta HOM05D009368 ORTHO05D000110 7.2e-104 380.6 188 100.0
Manes.12G096601 Manihot esculenta HOM05D009368 ORTHO05D000110 7.9e-87 323.9 180 88.9
Manes.08G086022 Manihot esculenta HOM05D009368 ORTHO05D000110 1.0e-86 323.6 180 89.4
Manes.17G120650 Manihot esculenta HOM05D009368 ORTHO05D000110 2.3e-86 322.4 180 87.8
Manes.08G043150 Manihot esculenta HOM05D009368 ORTHO05D000110 3.0e-86 322.0 179 88.3
Manes.11G103350 Manihot esculenta HOM05D009368 ORTHO05D000110 6.7e-86 320.9 180 88.3
Manes.06G045650 Manihot esculenta HOM05D009368 ORTHO05D000110 4.8e-84 314.7 180 87.2
Manes.04G031960 Manihot esculenta HOM05D009368 ORTHO05D000110 9.7e-77 290.4 162 88.3
Manes.17G004315 Manihot esculenta HOM05D009368 ORTHO05D000110 1.0e-65 253.8 149 87.9
Manes.03G071216 Manihot esculenta HOM05D009368 ORTHO05D000110 8.0e-63 244.2 180 71.1
Manes.09G086083 Manihot esculenta HOM05D009368 ORTHO05D000110 4.3e-56 221.9 180 66.7
Manes.12G085416 Manihot esculenta HOM05D009368 ORTHO05D000110 4.3e-56 221.9 127 89.8
Manes.12G049491 Manihot esculenta HOM05D009368 ORTHO05D000110 1.4e-54 216.9 180 65.0
Manes.02G219861 Manihot esculenta HOM05D009368 ORTHO05D000110 3.2e-51 205.7 121 87.6
Manes.11G099901 Manihot esculenta HOM05D009368 ORTHO05D000110 2.0e-50 203.0 116 90.5
Manes.17G025798 Manihot esculenta HOM05D009368 ORTHO05D000110 2.7e-50 202.6 115 90.4
Manes.14G173866 Manihot esculenta HOM05D009368 ORTHO05D000110 2.3e-49 199.5 106 95.3
Manes.04G063974 Manihot esculenta HOM05D009368 ORTHO05D000110 3.3e-48 195.7 149 73.2
Manes.07G093150 Manihot esculenta HOM05D009368 ORTHO05D000110 5.6e-48 194.9 106 94.3
Manes.11G039864 Manihot esculenta HOM05D009368 ORTHO05D000110 2.8e-47 192.6 103 94.2
Manes.02G212160 Manihot esculenta HOM05D009368 ORTHO05D000110 5.8e-45 184.9 102 92.2
Manes.13G092670 Manihot esculenta HOM05D009368 ORTHO05D000110 3.2e-43 179.1 98 92.9
Manes.11G055447 Manihot esculenta HOM05D009368 ORTHO05D000110 4.1e-43 178.7 97 93.8
Manes.18G126754 Manihot esculenta HOM05D009368 ORTHO05D000110 2.2e-36 156.4 175 52.6
Manes.04G009534 Manihot esculenta HOM05D009368 ORTHO05D000110 6.4e-36 154.8 84 94.0
Manes.05G138726 Manihot esculenta HOM05D009368 ORTHO05D000110 6.4e-36 154.8 84 94.0
Manes.13G069776 Manihot esculenta HOM05D009368 ORTHO05D000110 1.3e-33 147.1 81 93.8
Manes.05G086382 Manihot esculenta HOM05D009368 ORTHO05D000110 6.6e-33 144.8 118 63.6
Manes.08G069790 Manihot esculenta HOM05D009368 ORTHO05D000110 8.4e-28 127.9 70 85.7
Manes.04G059588 Manihot esculenta HOM05D009368 ORTHO05D000110 8.6e-25 117.9 116 58.6
Manes.11G039949 Manihot esculenta HOM05D009368 ORTHO05D000110 3.4e-21 105.9 61 90.2
Manes.02G221140 Manihot esculenta HOM05D009368 ORTHO05D000110 5.8e-21 105.1 61 90.2
Lj3g0001529 Lotus japonicus HOM05D013784 ORTHO05D000110 2.9e-12 76.3 116 32.8
HanXRQChr13g0412911 Helianthus annuus HOM05D024023 ORTHO05D000110 4.2e-11 72.4 178 27.0
HanXRQChr03g0064601 Helianthus annuus HOM05D015005 ORTHO05D000110 5.4e-11 72.0 126 27.0
HanXRQChr05g0161201 Helianthus annuus HOM05D015005 ORTHO05D000110 1.0e-09 67.8 117 26.5
HanXRQChr14g0443171 Helianthus annuus HOM05D015005 ORTHO05D000110 1.0e-09 67.8 117 26.5
TPR.G27572 Trifolium pratense HOM05D013784 ORTHO05D000110 1.3e-09 67.4 97 35.1
COL.COLO4_05846 Corchorus olitorius HOM05D014433 ORTHO05D000110 6.7e-09 65.1 165 29.1
HanXRQChr11g0337131 Helianthus annuus HOM05D015005 ORTHO05D000110 8.7e-09 64.7 117 24.8
Hund30116 Selenicereus undatus HOM05D001220 ORTHO05D000110 1.1e-08 64.3 127 26.8
HanXRQChr15g0469701 Helianthus annuus HOM05D008711 ORTHO05D010134 1.5e-08 63.9 141 24.8
COL.COLO4_24208 Corchorus olitorius HOM05D016401 ORTHO05D009534 7.4e-08 61.6 118 29.7
PGSC0003DMG400029963 Solanum tuberosum HOM05D014712 ORTHO05D000110 1.3e-07 60.8 109 27.5
TPR.G39386 Trifolium pratense HOM05D001220 ORTHO05D000110 1.6e-07 60.5 133 26.3
EL10Ac8g20312 Beta vulgaris HOM05D008659 ORTHO05D006083 2.1e-07 60.1 119 29.4
Oeu064174.1 Olea europaea HOM05D027131 ORTHO05D013900 2.1e-07 60.1 67 37.3
Sc03g0002640 Simmondsia chinensis HOM05D000420 ORTHO05D000110 2.8e-07 59.7 120 25.8
HanXRQChr01g0007361 Helianthus annuus HOM05D008711 ORTHO05D010134 4.8e-07 58.9 136 25.0
Hund24249 Selenicereus undatus HOM05D001220 ORTHO05D000110 4.8e-07 58.9 127 26.8
EL10Ac6g13749 Beta vulgaris HOM05D008659 ORTHO05D010848 6.2e-07 58.5 119 28.6
Glyma.08G326800 Glycine max HOM05D000420 ORTHO05D000110 6.2e-07 58.5 153 23.5
PGSC0003DMG400013049 Solanum tuberosum HOM05D009597 ORTHO05D000110 6.2e-07 58.5 125 28.0
Thecc.09G207400 Theobroma cacao HOM05D013693 ORTHO05D016279 8.1e-07 58.2 124 33.9
COL.COLO4_25435 Corchorus olitorius HOM05D016401 ORTHO05D025150 1.1e-06 57.8 154 28.6
Hund19567 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.4e-06 57.4 128 28.1
Hund27513 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.4e-06 57.4 128 28.1
COL.COLO4_29290 Corchorus olitorius HOM05D016401 ORTHO05D025150 1.8e-06 57.0 154 28.6
THA.LOC104822758 Tarenaya hassleriana HOM05D010522 ORTHO05D011833 2.4e-06 56.6 111 26.1
VMungo0720G0955 Vigna mungo HOM05D000107 ORTHO05D000110 4.0e-06 55.8 122 26.2
Hund01715 Selenicereus undatus HOM05D001220 ORTHO05D000110 5.3e-06 55.5 112 26.8


User provided reference genes

Program Settings