Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 9.2e-167 590.1 292 100.0
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.9e-124 449.5 293 77.1
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 9.1e-114 414.1 294 71.8
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.1e-111 407.1 282 72.3
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 5.5e-111 404.8 284 72.9
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 2.1e-110 402.9 283 71.7
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 3.6e-110 402.1 291 71.8
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 6.1e-110 401.4 289 70.6
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 7.9e-110 401.0 279 71.0
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 1.0e-109 400.6 286 71.0
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 5.2e-109 398.3 287 71.1
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 8.8e-109 397.5 282 71.6
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 7.4e-108 394.4 284 70.1
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 7.4e-108 394.4 284 70.1
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 7.4e-108 394.4 284 69.7
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 3.1e-106 389.0 279 69.2
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.1e-106 389.0 291 68.4
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 4.1e-106 388.7 287 70.7
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 9.1e-106 387.5 280 70.0
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 1.2e-105 387.1 280 69.6
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 7.7e-105 384.4 290 67.9
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 2.9e-104 382.5 285 69.1
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 6.5e-104 381.3 284 68.0
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 1.1e-103 380.6 280 70.7
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 1.5e-103 380.2 294 67.7
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 1.6e-102 376.7 280 68.6
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.4e-101 373.6 281 68.7
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 1.5e-100 370.2 280 66.8
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 3.7e-99 365.5 283 68.6
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 4.5e-97 358.6 286 66.1
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 1.3e-96 357.1 288 64.6
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.3e-96 357.1 279 65.9
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.3e-96 357.1 279 65.9
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 6.5e-96 354.8 290 62.8
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 2.3e-93 346.3 280 64.6
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 8.8e-93 344.4 286 62.2
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 1.2e-92 344.0 285 62.5
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 5.7e-92 341.7 287 64.1
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 2.2e-91 339.7 283 62.5
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 4.8e-91 338.6 261 65.9
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 3.5e-89 332.4 293 60.1
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 3.5e-89 332.4 282 62.4
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 1.7e-88 330.1 297 60.3
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 3.8e-88 328.9 282 61.3
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.5e-88 327.8 280 60.7
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 4.2e-87 325.5 282 60.3
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 7.2e-87 324.7 282 60.6
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 1.2e-86 323.9 289 58.8
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.6e-86 323.6 284 60.9
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 8.0e-86 321.2 290 60.3
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 1.2e-84 317.4 280 59.6
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.2e-84 317.4 280 59.6
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 1.2e-84 317.4 297 58.6
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.0e-84 316.6 280 59.6
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 3.4e-84 315.8 281 59.8
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.2e-83 313.2 237 68.4
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 4.1e-82 308.9 291 59.5
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 7.0e-82 308.1 286 56.6
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 7.0e-82 308.1 282 58.5
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 7.7e-81 304.7 285 57.5
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 2.3e-80 303.1 288 56.6
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 2.9e-80 302.8 287 57.1
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 1.9e-79 300.1 301 55.1
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 3.3e-79 299.3 286 55.2
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 4.3e-79 298.9 253 63.2
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 7.3e-79 298.1 279 57.7
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 9.5e-79 297.7 281 58.4
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 2.1e-78 296.6 250 62.4
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 8.0e-78 294.7 251 62.5
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 6.8e-77 291.6 288 55.6
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.3e-75 287.3 239 64.4
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 3.7e-75 285.8 235 64.7
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 5.4e-74 282.0 280 53.6
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 2.0e-73 280.0 280 56.4
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.7e-72 276.9 280 55.0
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 3.0e-72 276.2 265 57.4
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 5.8e-68 261.9 287 48.8
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 5.8e-68 261.9 243 57.2
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 4.1e-66 255.8 255 56.1
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 4.6e-65 252.3 276 50.0
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 4.6e-65 252.3 290 49.7
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 7.8e-65 251.5 280 52.1
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 8.6e-64 248.1 283 48.4
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.4e-60 236.1 280 50.0
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.9e-58 230.3 241 52.7
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 4.1e-58 229.2 296 44.6
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 1.3e-56 224.2 298 47.7
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 1.5e-55 220.7 265 50.6
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 3.3e-55 219.5 202 59.9
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 2.2e-51 206.8 202 58.4
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 2.9e-51 206.5 167 66.5
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 2.9e-51 206.5 167 66.5
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 4.9e-51 205.7 167 65.9
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 1.4e-50 204.1 202 58.9
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 5.4e-50 202.2 167 65.3
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 2.1e-49 200.3 201 57.2
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 7.8e-49 198.4 201 56.7
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 1.7e-48 197.2 201 56.2
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 1.7e-48 197.2 116 81.9
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 5.1e-48 195.7 245 46.1
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 1.2e-46 191.0 295 37.6
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 4.0e-45 186.0 290 38.3
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.2e-44 184.5 173 57.2
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 9.9e-44 181.4 236 45.8
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.0e-40 171.4 135 64.4
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 3.0e-40 169.9 128 64.1
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 1.9e-39 167.2 167 59.9
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 4.3e-39 166.0 229 44.1
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 9.6e-39 164.9 143 56.6
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.0e-37 159.5 207 47.8
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 7.1e-34 148.7 95 75.8
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 2.1e-33 147.1 206 48.1
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 3.5e-33 146.4 183 47.5
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 9.0e-29 131.7 68 86.8
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 6.4e-27 125.6 211 41.7
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 3.3e-23 113.2 216 37.0
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 7.1e-18 95.5 82 59.8
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 1.6e-14 84.3 75 60.0
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 3.7e-14 83.2 93 49.5
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 3.1e-13 80.1 50 72.0
Cpa.g.sc82.29 Carica papaya HOM05D006517 ORTHO05D007886 6.5e-11 72.4 68 54.4
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 3.3e-07 60.1 119 31.9
TWI09G1601 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 5.7e-07 59.3 119 30.3
SalBow6G0039 Salvia bowleyana HOM05D006517 ORTHO05D007886 9.7e-07 58.5 27 88.9
Cfa025238 Carpinus fangiana HOM05D003211 ORTHO05D003621 2.2e-06 57.4 60 40.0
Psat2g015120 Pisum sativum HOM05D000088 ORTHO05D003056 2.2e-06 57.4 85 35.3
Thecc.06G161000 Theobroma cacao HOM05D000088 ORTHO05D003056 6.3e-06 55.8 92 30.4


User provided reference genes

Program Settings