Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G048716 Manihot esculenta HOM05D000002 ORTHO05D000047 3.9e-47 191.0 92 100.0
Manes.11G086565 Manihot esculenta HOM05D000002 ORTHO05D000047 9.8e-14 80.1 74 50.0
Cpa.g.sc697.1 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-13 79.3 79 46.8
Manes.14G103250 Manihot esculenta HOM05D000002 ORTHO05D000001 2.2e-13 79.0 74 47.3
Manes.12G089940 Manihot esculenta HOM05D000002 ORTHO05D000047 8.3e-13 77.0 74 50.0
Manes.15G169950 Manihot esculenta HOM05D000002 ORTHO05D000047 1.1e-12 76.6 74 50.0
Cpa.g.sc140.18 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-11 72.0 71 47.9
Cpa.g.sc190.36 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-11 72.0 74 47.3
Cpa.g.sc536.2 Carica papaya HOM05D000002 ORTHO05D000047 7.8e-11 70.5 70 45.7
Cpa.g.sc30.126 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-10 69.3 70 45.7
Cpa.g.sc15.138 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-10 68.6 74 44.6
Cpa.g.sc37.124 Carica papaya HOM05D000002 ORTHO05D000047 5.0e-10 67.8 72 48.6
Sopen06g018740 Solanum pennellii HOM05D000002 ORTHO05D000047 6.6e-10 67.4 74 41.9
SHI01914 Sapria himalayana HOM05D000002 ORTHO05D000047 8.6e-10 67.0 73 46.6
Cpa.g.sc5.92 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-09 65.9 93 39.8
Manes.16G040701 Manihot esculenta HOM05D000002 ORTHO05D000047 4.3e-09 64.7 72 40.3
Cpa.g.sc39.94 Carica papaya HOM05D000002 ORTHO05D000047 9.5e-09 63.5 74 37.8
Cpa.g.sc52.164 Carica papaya HOM05D000002 ORTHO05D000047 9.5e-09 63.5 60 48.3
Sopen05g009170 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-09 63.5 74 37.8
Sopen08g006360 Solanum pennellii HOM05D000002 ORTHO05D000047 9.5e-09 63.5 79 38.0
AUR62027544 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.1e-08 62.4 72 43.1
SHI22594 Sapria himalayana HOM05D000002 ORTHO05D000047 2.1e-08 62.4 73 42.5
Cpa.g.sc77.19 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-08 62.0 70 44.3
AUR62016469 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.8e-08 62.0 72 38.9
AUR62022084 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.8e-08 62.0 72 40.3
ECA234G1315 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-08 62.0 75 44.0
Manes.15G179768 Manihot esculenta HOM05D000002 ORTHO05D000047 2.8e-08 62.0 72 40.3
Peaxi162Scf00684g00410 Petunia axillaris HOM05D000002 ORTHO05D000047 3.6e-08 61.6 85 41.2
Sopen06g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-08 61.6 74 37.8
Sopen09g006530 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-08 61.6 74 37.8
Sopen12g022330 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-08 61.6 74 37.8
CAN.G989.5 Capsicum annuum HOM05D005064 ORTHO05D000001 4.7e-08 61.2 74 43.2
ECA248G2103 Erigeron canadensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 72 44.4
AUR62019880 Chenopodium quinoa HOM05D000143 ORTHO05D000072 6.1e-08 60.8 84 34.5
ECA238G0518 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-08 60.5 72 43.1
Cpa.g.sc3.241 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-07 60.1 74 41.9
AUR62043221 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.0e-07 60.1 72 41.7
Manes.02G195350 Manihot esculenta HOM05D000002 ORTHO05D000047 1.0e-07 60.1 72 37.5
Rhsim04G0189400 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.0e-07 60.1 71 39.4
Atru.chr10.709 Acer truncatum HOM05D000002 ORTHO05D000047 1.4e-07 59.7 72 43.1
AUR62022085 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.4e-07 59.7 72 38.9
ECA232G3619 Erigeron canadensis HOM05D000002 ORTHO05D000047 1.4e-07 59.7 72 43.1
Hma1.2p1_0334F.1_g128620 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 59.3 76 36.8
Hma1.2p1_1961F.1_g309190 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 59.3 73 34.2
Sopen03g027250 Solanum pennellii HOM05D000002 ORTHO05D000047 1.8e-07 59.3 74 37.8
Sopen06g032090 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.3 74 37.8
EL10Ac3g07200 Beta vulgaris HOM05D000002 ORTHO05D000047 2.3e-07 58.9 84 36.9
Cpa.g.sc82.45 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-07 58.9 71 40.8
AUR62023412 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.3e-07 58.9 71 39.4
SHI01819 Sapria himalayana HOM05D000002 ORTHO05D000047 2.3e-07 58.9 73 43.8
Sopen12g021100 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-07 58.9 71 39.4
Sopen00g008930 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 58.5 71 39.4
Sopen02g038380 Solanum pennellii HOM05D000002 ORTHO05D000047 3.0e-07 58.5 70 37.1
ECA238G2758 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-07 58.2 77 40.3
Hma1.2p1_1450F.1_g284220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-07 58.2 73 35.6
Manes.04G028650 Manihot esculenta HOM05D000002 ORTHO05D000047 4.0e-07 58.2 72 37.5
Manes.15G178633 Manihot esculenta HOM05D000002 ORTHO05D000047 4.0e-07 58.2 74 44.6
AUR62016744 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.2e-07 57.8 72 40.3
ECA240G3082 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-07 57.8 72 41.7
ECA246G2137 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-07 57.8 72 41.7
Hma1.2p1_0148F.1_g066260 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.2e-07 57.8 73 35.6
Manes.06G025950 Manihot esculenta HOM05D000002 ORTHO05D000047 5.2e-07 57.8 71 45.1
Manes.S095206 Manihot esculenta HOM05D000002 ORTHO05D000047 5.2e-07 57.8 74 37.8
Sopen10g018740 Solanum pennellii HOM05D000002 ORTHO05D000047 5.2e-07 57.8 74 37.8
Manes.13G069751 Manihot esculenta HOM05D000002 ORTHO05D000047 6.8e-07 57.4 71 45.1
Manes.S095211 Manihot esculenta HOM05D000002 ORTHO05D000047 6.8e-07 57.4 71 45.1
Sopen01g026890 Solanum pennellii HOM05D000002 ORTHO05D000047 6.8e-07 57.4 71 35.2
Sopen02g022150 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-07 57.4 71 36.6
Sopen02g029900 Solanum pennellii HOM05D000002 ORTHO05D000047 6.8e-07 57.4 71 36.6
Sopen03g012070 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-07 57.4 70 38.6
Sopen04g002850 Solanum pennellii HOM05D000002 ORTHO05D000047 6.8e-07 57.4 71 36.6
Sopen05g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-07 57.4 71 36.6
Sopen05g030510 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-07 57.4 71 36.6
EL10Ac4g09008 Beta vulgaris HOM05D000002 ORTHO05D000047 8.9e-07 57.0 91 33.0
ECA238G2753 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-07 57.0 72 43.1
Hma1.2p1_0052F.1_g030380 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.9e-07 57.0 73 32.9
ECA240G1852 Erigeron canadensis HOM05D001201 ORTHO05D000001 1.2e-06 56.6 72 41.7
Sopen08g004960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 71 38.0
Sopen08g020190 Solanum pennellii HOM05D000002 ORTHO05D000047 1.2e-06 56.6 71 39.4
Sopen09g026920 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 74 36.5
Sopen12g026990 Solanum pennellii HOM05D000002 ORTHO05D000047 1.2e-06 56.6 71 38.0
ECA238G4187 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 56.2 72 41.7
Sopen08g020200 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 56.2 71 38.0
Atru.chr3.2976 Acer truncatum HOM05D000002 ORTHO05D000047 2.0e-06 55.8 76 38.2
Hma1.2p1_0495F.1_g165770 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-06 55.8 73 34.2
Manes.07G076428 Manihot esculenta HOM05D000002 ORTHO05D000047 2.0e-06 55.8 72 41.7
Nn8g40014 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.0e-06 55.8 71 40.8
Sopen00g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 74 37.8
Sopen01g031670 Solanum pennellii HOM05D000002 ORTHO05D000047 2.0e-06 55.8 71 38.0
Sopen04g035530 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 71 33.8
Sopen05g027120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 70 37.1
Sopen06g018590 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 71 33.8
Sopen06g021680 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 71 33.8
Sopen09g013050 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.8 70 37.1
Cpa.g.sc14.56 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 55.5 56 48.2
ECA240G0684 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-06 55.5 72 41.7
Sopen02g013440 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 71 33.8
Sopen02g020640 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 71 33.8
Sopen04g014630 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 71 33.8
Sopen05g028940 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 71 33.8
Sopen07g004340 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 71 33.8
Sopen11g023580 Solanum pennellii HOM05D000002 ORTHO05D000047 2.6e-06 55.5 71 40.8
Sopen12g023410 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 55.5 71 33.8
CANSAT56G0197 Cannabis sativa HOM05D000002 ORTHO05D000047 3.4e-06 55.1 71 36.6
Cpa.g.sc344.1 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-06 55.1 69 40.6
Cpa.g.sc60.49 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-06 55.1 85 41.2
AUR62009467 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.4e-06 55.1 72 40.3
ECA233G3007 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-06 55.1 72 40.3
Manes.05G202851 Manihot esculenta HOM05D000002 ORTHO05D000047 3.4e-06 55.1 52 57.7
Sopen08g006570 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-06 55.1 70 37.1
Hma1.2p1_0895F.1_g233710 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.4e-06 54.7 71 31.0
Sopen03g004130 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 54.7 71 38.0
Sopen08g015340 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 54.7 71 36.6
EL10Ac3g07170 Beta vulgaris HOM05D000002 ORTHO05D000047 5.7e-06 54.3 84 36.9
ECA246G2633 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-06 54.3 72 41.7
MD01G1096500 Malus domestica HOM05D000002 ORTHO05D000001 5.7e-06 54.3 75 34.7
MD11G1107300 Malus domestica HOM05D000002 ORTHO05D000001 5.7e-06 54.3 75 34.7
Sc13g0007160 Simmondsia chinensis HOM05D000002 ORTHO05D000047 5.7e-06 54.3 74 33.8
Sopen03g021530 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 70 37.1
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 5.7e-06 54.3 71 36.6
Sopen07g024780 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 71 38.0
Sopen07g025480 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 71 36.6
Sopen08g020040 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 70 37.1
Sopen09g006500 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 71 38.0
Sopen10g035970 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 54.3 70 37.1
MD10G1307000 Malus domestica HOM05D000002 ORTHO05D000001 7.5e-06 53.9 72 34.7
Sabra16G0048200 Salix brachista HOM05D000002 ORTHO05D000047 7.5e-06 53.9 74 36.5
Sopen06g021180 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-06 53.9 71 38.0
Sopen08g020560 Solanum pennellii HOM05D000002 ORTHO05D000047 7.5e-06 53.9 71 38.0
Sopen09g009900 Solanum pennellii HOM05D000014 ORTHO05D000016 7.5e-06 53.9 71 38.0
Sopen11g005430 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-06 53.9 71 38.0
Sopen12g022690 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-06 53.9 71 38.0
Ah.11g048420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 9.8e-06 53.5 79 35.4
CANSAT80G2140 Cannabis sativa HOM05D000002 ORTHO05D000047 9.8e-06 53.5 71 33.8
ECA236G0432 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.8e-06 53.5 72 41.7
ECA246G0554 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.8e-06 53.5 72 40.3
ECA247G3256 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.8e-06 53.5 72 38.9
Manes.07G072514 Manihot esculenta HOM05D000002 ORTHO05D000047 9.8e-06 53.5 66 39.4
Sopen01g013170 Solanum pennellii HOM05D000002 ORTHO05D000047 9.8e-06 53.5 71 36.6
Sopen01g017820 Solanum pennellii HOM05D000002 ORTHO05D000047 9.8e-06 53.5 71 36.6
Sopen02g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-06 53.5 71 38.0
Sopen04g033280 Solanum pennellii HOM05D000002 ORTHO05D000047 9.8e-06 53.5 71 36.6
Sopen05g011620 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-06 53.5 71 36.6


User provided reference genes

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