Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 8.6e-131 470.3 235 100.0
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 4.1e-117 424.9 240 88.8
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 2.7e-116 422.2 236 88.6
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 6.0e-116 421.0 239 87.9
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 1.7e-115 419.5 238 88.2
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 2.5e-114 415.6 236 86.9
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 2.1e-113 412.5 235 87.2
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 3.6e-113 411.8 236 86.4
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 3.6e-113 411.8 235 87.2
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 6.2e-113 411.0 235 86.4
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 1.1e-112 410.2 235 86.4
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 1.1e-112 410.2 234 86.3
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 1.8e-112 409.5 235 86.0
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 8.9e-112 407.1 235 86.8
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 1.5e-111 406.4 243 84.8
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 3.4e-111 405.2 241 82.6
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 5.8e-111 404.4 236 85.2
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 9.9e-111 403.7 235 85.1
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 1.3e-110 403.3 236 84.3
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 2.2e-110 402.5 238 84.5
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 6.4e-110 401.0 231 84.4
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.4e-110 401.0 231 84.4
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.4e-110 401.0 231 84.4
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 8.4e-110 400.6 235 84.3
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 8.4e-110 400.6 231 84.0
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 8.4e-110 400.6 231 84.0
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 1.4e-109 399.8 231 85.3
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.9e-109 399.4 231 83.5
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 7.1e-109 397.5 228 86.0
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 1.2e-108 396.7 231 83.1
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 1.6e-108 396.4 235 85.1
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 2.1e-108 396.0 235 83.0
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 3.5e-108 395.2 235 83.0
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 4.6e-108 394.8 235 84.3
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 6.0e-108 394.4 235 83.0
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 7.8e-108 394.0 235 83.0
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.0e-107 393.7 235 81.7
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 1.7e-107 392.9 235 81.7
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 3.9e-107 391.7 235 83.4
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 5.1e-107 391.3 239 81.6
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 6.6e-107 391.0 235 82.6
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 6.6e-107 391.0 231 82.7
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.9e-106 389.4 235 81.3
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 2.5e-106 389.0 231 81.8
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 3.3e-106 388.7 239 81.2
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 7.3e-106 387.5 235 80.9
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.2e-105 386.7 224 82.1
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.2e-105 386.7 224 82.1
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 1.2e-105 386.7 235 80.4
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 1.6e-105 386.3 235 81.7
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 2.1e-105 386.0 235 79.1
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 2.1e-105 386.0 231 81.0
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 3.6e-105 385.2 235 82.1
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 4.7e-105 384.8 235 82.1
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 4.7e-105 384.8 240 79.2
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 8.1e-105 384.0 234 81.6
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 1.8e-104 382.9 235 81.3
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 2.4e-104 382.5 250 78.4
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 3.1e-104 382.1 237 81.9
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 3.1e-104 382.1 233 82.0
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 8.9e-104 380.6 235 78.7
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 1.2e-103 380.2 235 80.4
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.5e-103 379.8 220 82.3
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 3.4e-103 378.6 235 77.9
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 9.9e-103 377.1 235 77.4
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 1.3e-102 376.7 240 77.5
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 1.3e-102 376.7 238 78.2
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 2.2e-102 375.9 235 79.1
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 2.2e-102 375.9 236 79.7
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 3.8e-102 375.2 236 80.9
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 1.1e-101 373.6 235 77.9
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 1.1e-101 373.6 235 78.3
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 1.4e-101 373.2 239 75.7
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 2.4e-101 372.5 235 78.7
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 2.4e-101 372.5 235 77.9
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 7.1e-101 370.9 233 76.0
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 1.2e-100 370.2 231 78.4
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 4.6e-100 368.2 231 77.5
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 1.3e-99 366.7 225 81.3
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.7e-99 366.3 236 76.3
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 2.3e-99 365.9 235 75.7
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 2.3e-99 365.9 235 75.7
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 2.3e-99 365.9 235 75.3
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 3.9e-99 365.2 230 77.8
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 3.9e-99 365.2 235 74.9
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 6.6e-99 364.4 223 78.0
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 8.7e-99 364.0 235 74.9
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 8.7e-99 364.0 235 76.6
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 8.7e-99 364.0 236 75.8
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 1.1e-98 363.6 233 76.8
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 1.5e-98 363.2 229 78.6
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 1.9e-98 362.8 235 76.6
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 2.5e-98 362.5 236 75.8
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 2.5e-98 362.5 236 77.5
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 3.3e-98 362.1 240 75.0
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 4.3e-98 361.7 235 75.3
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 7.3e-98 360.9 225 77.3
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 1.3e-97 360.1 233 76.4
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 2.8e-97 359.0 230 77.4
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 4.0e-96 355.1 236 76.3
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 4.0e-96 355.1 225 76.4
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 1.2e-95 353.6 225 77.8
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 1.5e-95 353.2 230 75.7
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 3.4e-95 352.1 304 61.5
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 5.8e-95 351.3 231 77.1
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 6.4e-94 347.8 235 76.2
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 9.3e-93 344.0 259 66.8
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 1.6e-92 343.2 329 58.7
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 1.0e-91 340.5 240 74.2
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 2.3e-91 339.3 225 71.1
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 5.1e-91 338.2 235 72.3
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 1.9e-90 336.3 223 69.5
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 6.9e-88 327.8 187 85.6
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 1.5e-87 326.6 235 68.9
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 9.9e-87 323.9 192 80.2
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 9.3e-85 317.4 233 65.7
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.6e-84 316.6 223 66.4
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 6.0e-84 314.7 235 67.2
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 1.3e-83 313.5 235 66.8
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 3.0e-83 312.4 225 63.6
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 5.1e-83 311.6 199 79.4
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 1.9e-82 309.7 236 70.8
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 2.8e-81 305.8 194 76.3
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 3.7e-81 305.4 198 76.3
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 2.2e-70 269.6 168 78.6
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 9.3e-69 264.2 197 66.0
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 3.0e-67 259.2 154 83.1
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.8e-65 252.7 224 60.3
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 9.7e-58 227.6 218 51.8
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 2.8e-57 226.1 154 67.5
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 2.7e-44 183.0 119 70.6
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 3.8e-38 162.5 105 79.0
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 1.4e-35 154.1 189 38.6
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 1.1e-29 134.4 97 73.2
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 3.1e-24 116.3 208 32.7
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 4.0e-11 72.8 74 45.9


User provided reference genes

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