Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 3.9e-128 461.5 227 100.0
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 1.8e-53 213.4 198 62.6
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.6e-33 147.1 215 47.0
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 2.7e-33 146.4 219 42.5
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.0e-32 144.4 204 43.6
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.4e-32 144.1 217 43.8
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.8e-32 143.7 200 44.0
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.4e-31 139.0 200 47.0
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.4e-31 139.0 213 45.1
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.5e-31 138.3 194 45.4
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 7.5e-31 138.3 209 41.6
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 7.5e-31 138.3 204 47.1
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 9.8e-31 137.9 214 44.9
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 1.3e-30 137.5 214 40.7
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.7e-30 137.1 194 44.8
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 2.2e-30 136.7 196 41.8
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.2e-30 136.7 213 44.6
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 3.7e-30 136.0 204 43.6
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 2.4e-29 133.3 198 43.4
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 5.4e-29 132.1 194 44.8
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 1.3e-27 127.5 210 42.9
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.7e-27 127.1 202 42.1
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.9e-27 126.3 199 45.7
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.9e-27 126.3 199 46.2
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 6.5e-27 125.2 200 39.0
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.1e-26 124.4 217 40.6
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.1e-26 124.4 198 41.4
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.1e-26 124.4 204 41.2
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.5e-26 124.0 209 38.8
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.9e-26 123.6 203 40.9
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.5e-26 123.2 203 41.9
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 2.5e-26 123.2 193 43.0
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 7.2e-26 121.7 198 41.4
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.2e-26 121.7 199 46.2
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 9.4e-26 121.3 200 38.0
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 9.4e-26 121.3 200 38.0
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 1.2e-25 120.9 190 42.6
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.6e-25 120.6 202 42.1
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 2.1e-25 120.2 201 38.3
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 2.1e-25 120.2 198 38.9
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.7e-25 119.8 193 39.4
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 3.6e-25 119.4 201 41.8
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 3.6e-25 119.4 197 39.6
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 4.7e-25 119.0 205 39.0
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 8.0e-25 118.2 210 41.9
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 8.0e-25 118.2 209 40.7
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.8e-24 117.1 206 39.8
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 8.8e-24 114.8 189 40.7
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.8e-24 114.8 194 37.6
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 1.2e-23 114.4 197 37.6
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.5e-23 114.0 194 38.7
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 1.5e-23 114.0 220 34.5
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 2.6e-23 113.2 206 39.8
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 2.6e-23 113.2 206 39.8
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 2.6e-23 113.2 199 39.7
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 3.4e-23 112.8 202 40.1
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 3.4e-23 112.8 197 37.1
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 5.7e-23 112.1 208 38.9
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 5.7e-23 112.1 202 39.6
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 5.7e-23 112.1 208 38.9
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 5.7e-23 112.1 203 37.9
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 7.5e-23 111.7 206 38.8
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 7.5e-23 111.7 200 38.0
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 7.5e-23 111.7 188 36.2
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.3e-22 110.9 206 34.5
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.8e-22 109.8 195 38.5
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 4.9e-22 109.0 197 38.6
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 4.9e-22 109.0 197 38.6
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 4.9e-22 109.0 194 37.1
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.9e-22 109.0 194 37.1
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 6.3e-22 108.6 188 36.7
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 6.3e-22 108.6 201 36.3
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 8.3e-22 108.2 198 42.9
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 8.3e-22 108.2 200 39.5
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 1.4e-21 107.5 202 38.6
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 1.8e-21 107.1 201 38.8
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.8e-21 107.1 223 35.4
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 3.1e-21 106.3 200 37.0
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 3.1e-21 106.3 215 34.4
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 5.4e-21 105.5 195 36.4
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 5.4e-21 105.5 206 34.0
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 5.4e-21 105.5 200 36.0
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 9.1e-21 104.8 200 37.5
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 9.1e-21 104.8 202 33.7
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.2e-20 104.4 212 34.4
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 1.6e-20 104.0 197 33.5
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 4.5e-20 102.4 202 33.2
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 5.9e-20 102.1 198 37.4
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 7.7e-20 101.7 207 35.3
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 1.7e-19 100.5 195 35.9
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 2.3e-19 100.1 206 34.5
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.1e-18 97.8 192 33.9
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 1.1e-18 97.8 203 34.5
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 1.5e-18 97.4 215 34.4
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 1.5e-18 97.4 202 36.1
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.9e-18 97.1 192 32.3
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 4.3e-18 95.9 204 35.3
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 7.2e-18 95.1 187 35.3
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 1.2e-17 94.4 187 35.8
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.6e-17 94.0 201 32.3
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 4.7e-17 92.4 216 33.3
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 6.1e-17 92.0 193 39.9
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 8.0e-17 91.7 199 32.7
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 1.8e-16 90.5 204 35.3
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 5.2e-16 89.0 207 32.9
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 6.8e-16 88.6 202 34.7
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 6.8e-16 88.6 201 35.8
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 1.5e-15 87.4 207 35.7
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 2.0e-15 87.0 188 35.1
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 2.6e-15 86.7 209 35.9
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 2.6e-15 86.7 202 35.6
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 4.4e-15 85.9 193 34.2
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 9.8e-15 84.7 195 34.4
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 2.9e-14 83.2 193 34.7
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 2.4e-13 80.1 200 32.0
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 2.0e-12 77.0 204 33.8
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 5.9e-12 75.5 202 28.2
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 7.8e-12 75.1 195 29.7
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 1.0e-11 74.7 203 28.1
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 2.3e-11 73.6 90 45.6
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 1.5e-10 70.9 207 31.9
PSO386G0064 Papaver somniferum HOM05D005897 ORTHO05D007128 4.7e-09 65.9 218 28.9
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 8.0e-09 65.1 148 37.2
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 1.0e-08 64.7 219 30.1
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 1.0e-08 64.7 196 31.1
DCAR_005065 Daucus carota HOM05D005897 ORTHO05D007128 1.5e-07 60.8 196 31.1
Aqoxy7G00993 Aquilegia oxysepala HOM05D005897 ORTHO05D007128 4.9e-06 55.8 190 25.8
DCAR_011924 Daucus carota HOM05D005897 ORTHO05D007128 4.9e-06 55.8 180 28.3
HPP92_009417 Vanilla planifolia HOM05D005897 ORTHO05D007128 4.9e-06 55.8 185 30.3


User provided reference genes

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