Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 1.2e-46 189.5 98 100.0
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 7.7e-33 143.7 98 76.5
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 4.1e-26 121.3 103 65.0
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 7.0e-26 120.6 98 66.3
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 1.5e-25 119.4 99 65.7
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 7.7e-25 117.1 98 66.3
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 1.7e-24 115.9 98 62.2
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 3.8e-24 114.8 102 62.7
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 8.5e-24 113.6 101 63.4
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 3.2e-23 111.7 98 63.3
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 9.4e-23 110.2 98 63.3
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 1.2e-22 109.8 100 60.0
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 4.7e-22 107.8 102 59.8
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 3.0e-21 105.1 102 57.8
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 4.0e-21 104.8 89 61.8
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 5.2e-21 104.4 104 56.7
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 5.2e-21 104.4 102 57.8
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 5.2e-21 104.4 98 61.2
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 6.7e-21 104.0 98 63.3
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 1.5e-20 102.8 106 56.6
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 2.6e-20 102.1 102 57.8
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 2.6e-20 102.1 102 59.8
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 4.4e-20 101.3 106 53.8
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 7.4e-20 100.5 105 56.2
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 7.4e-20 100.5 85 64.7
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 7.4e-20 100.5 107 52.3
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 1.3e-19 99.8 101 55.4
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 1.7e-19 99.4 105 57.1
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 1.7e-19 99.4 106 52.8
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 1.7e-19 99.4 106 52.8
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 4.8e-19 97.8 107 51.4
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 4.8e-19 97.8 107 51.4
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 2.4e-18 95.5 98 56.1
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 4.1e-18 94.7 98 56.1
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 4.1e-18 94.7 97 56.7
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 5.3e-18 94.4 99 59.6
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 5.3e-18 94.4 96 53.1
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 7.0e-18 94.0 102 53.9
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 9.1e-18 93.6 85 61.2
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 1.2e-17 93.2 105 52.4
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.2e-17 93.2 100 55.0
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 1.2e-17 93.2 97 55.7
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 1.2e-17 93.2 98 54.1
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 1.6e-17 92.8 102 53.9
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 1.6e-17 92.8 102 53.9
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.6e-17 92.8 98 57.1
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 1.6e-17 92.8 98 55.1
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 2.6e-17 92.0 98 56.1
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 2.6e-17 92.0 98 55.1
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 3.5e-17 91.7 106 54.7
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 3.5e-17 91.7 104 53.8
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 1.0e-16 90.1 101 53.5
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 1.7e-16 89.4 102 50.0
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 1.7e-16 89.4 83 59.0
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 2.9e-16 88.6 64 64.1
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 5.0e-16 87.8 97 51.5
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 6.5e-16 87.4 96 50.0
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 6.5e-16 87.4 104 46.2
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 6.5e-16 87.4 105 49.5
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 8.5e-16 87.0 101 52.5
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 1.1e-15 86.7 154 37.7
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 3.2e-15 85.1 59 66.1
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 4.2e-15 84.7 77 58.4
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 7.2e-15 84.0 109 46.8
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 9.4e-15 83.6 99 50.5
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 1.2e-14 83.2 106 49.1
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.2e-14 83.2 57 63.2
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.2e-14 83.2 57 63.2
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 2.1e-14 82.4 97 51.5
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 2.7e-14 82.0 95 47.4
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 3.6e-14 81.6 112 47.3
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 3.6e-14 81.6 98 48.0
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 8.0e-14 80.5 84 53.6
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 1.4e-13 79.7 79 51.9
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 3.0e-13 78.6 105 47.6
FAN28G0689 Fragaria x ananassa HOM05D007531 ORTHO05D009484 4.0e-13 78.2 107 45.8
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 5.2e-13 77.8 55 63.6
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 5.2e-13 77.8 55 67.3
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 6.8e-13 77.4 68 58.8
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 8.8e-13 77.0 101 48.5
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 2.6e-12 75.5 80 50.0
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 4.4e-12 74.7 109 44.0
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 4.4e-12 74.7 109 44.0
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 4.4e-12 74.7 53 64.2
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 4.8e-11 71.2 104 43.3
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 6.3e-11 70.9 53 62.3
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 6.3e-11 70.9 53 62.3
Phvul.003G128000 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 1.1e-10 70.1 51 64.7
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 1.8e-10 69.3 48 66.7
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 7.0e-10 67.4 48 64.6
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 2.0e-09 65.9 81 45.7
VMungo1215G2546 Vigna mungo HOM05D007531 ORTHO05D009484 4.5e-09 64.7 42 66.7
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 1.0e-08 63.5 43 67.4


User provided reference genes

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