Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 9.9e-267 922.9 482 100.0
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 2.7e-99 366.7 624 42.1
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 7.0e-87 325.5 611 39.1
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.9e-77 293.1 580 39.5
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.8e-74 284.3 667 35.8
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 3.1e-74 283.5 599 37.9
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.6e-70 271.2 545 38.9
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.0e-69 268.5 521 38.2
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 5.0e-69 266.2 575 36.5
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 7.3e-68 262.3 560 37.3
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.6e-67 261.2 616 34.6
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 4.0e-66 256.5 579 34.9
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 8.9e-66 255.4 558 36.4
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.2e-65 255.0 590 36.4
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.1e-63 245.7 593 37.1
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.6e-62 244.6 492 36.8
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.3e-61 241.5 596 36.7
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.0e-61 240.4 594 35.7
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.3e-58 230.7 556 34.2
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 5.2e-58 229.6 406 40.6
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 3.4e-57 226.9 541 34.0
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.9e-56 223.0 581 32.2
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 6.4e-56 222.6 552 33.3
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.4e-55 221.5 582 33.5
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-55 221.1 557 33.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 7.1e-55 219.2 708 31.2
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 9.2e-55 218.8 557 32.7
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 9.2e-55 218.8 611 30.8
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-54 218.4 556 32.7
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-52 211.1 580 32.1
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 6.2e-51 206.1 328 43.0
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.4e-50 204.9 545 33.0
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 4.0e-50 203.4 554 30.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 4.4e-49 199.9 607 31.5
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 9.9e-49 198.7 614 32.2
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.9e-48 196.4 302 44.4
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 6.4e-48 196.1 490 34.5
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.7e-46 190.7 303 43.6
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.5e-46 190.3 303 43.6
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 3.5e-46 190.3 598 28.6
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.0e-45 188.7 529 34.0
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.3e-45 188.3 412 35.9
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 1.7e-45 188.0 559 33.1
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 7.3e-44 182.6 676 28.0
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 2.1e-43 181.0 586 30.7
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 3.6e-43 180.3 566 30.7
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 6.9e-42 176.0 618 30.1
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.4e-41 173.7 699 27.0
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 4.4e-41 173.3 499 29.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 5.8e-41 172.9 630 29.5
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 6.4e-40 169.5 640 28.1
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 4.6e-38 163.3 126 61.9
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 7.9e-38 162.5 512 30.1
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 1.3e-37 161.8 512 29.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.0e-37 160.6 121 62.8
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 5.1e-37 159.8 339 35.4
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 1.5e-36 158.3 497 30.8
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 7.3e-36 156.0 133 59.4
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 9.6e-36 155.6 516 31.8
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.3e-35 155.2 127 57.5
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.6e-35 154.8 129 59.7
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.1e-35 154.5 511 28.6
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.1e-34 152.1 748 25.4
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 3.1e-34 150.6 512 28.1
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 5.3e-34 149.8 117 59.8
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 9.0e-34 149.1 133 55.6
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.0e-33 147.9 498 28.5
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 4.5e-33 146.7 231 42.0
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 9.9e-33 145.6 242 37.6
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.7e-32 144.8 250 36.8
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.9e-32 144.1 369 32.5
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.9e-32 144.1 201 44.3
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.1e-31 142.1 178 42.7
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.9e-31 141.4 483 29.8
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 2.4e-31 141.0 527 27.5
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 3.2e-31 140.6 128 56.2
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 9.3e-31 139.0 594 28.3
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.6e-30 138.3 498 28.9
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.7e-30 137.5 517 26.9
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.7e-30 137.5 568 27.6
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 7.9e-30 136.0 272 36.4
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.0e-29 135.6 141 48.2
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 6.7e-29 132.9 497 29.4
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.5e-28 131.7 591 25.5
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 2.5e-28 131.0 579 25.7
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 4.3e-28 130.2 486 30.5
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 4.3e-28 130.2 274 38.7
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.6e-27 128.3 578 27.0
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.6e-27 128.3 148 48.6
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 2.8e-27 127.5 459 30.9
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 8.1e-27 125.9 501 26.3
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 2.4e-26 124.4 509 27.7
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.6e-25 120.9 299 34.8
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 6.7e-21 106.3 606 23.8
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.1e-20 105.5 259 31.7
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 9.0e-18 95.9 247 32.4
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 3.4e-17 94.0 136 35.3
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.0e-16 92.4 81 58.0
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.3e-16 92.0 145 35.2
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.9e-16 90.9 362 28.5
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 3.8e-16 90.5 264 28.4
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.2e-14 85.5 139 35.3
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 4.6e-14 83.6 166 30.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.8e-13 81.6 141 33.3
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.8e-13 81.6 141 33.3
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 3.9e-13 80.5 121 41.3
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.5e-12 78.6 173 35.3
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 3.3e-12 77.4 128 31.2
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 3.4e-09 67.4 122 38.5
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 4.5e-09 67.0 393 25.7
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 7.7e-09 66.2 352 26.1
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.2e-08 64.7 198 28.3
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.5e-07 61.2 77 33.8


User provided reference genes

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