Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 5.8e-124 447.6 227 100.0
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 5.1e-104 381.3 224 84.8
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 5.6e-103 377.9 225 84.0
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.6e-102 376.3 225 83.6
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.1e-101 373.6 225 84.4
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 1.4e-101 373.2 225 84.0
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 6.8e-101 370.9 225 84.0
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.5e-100 369.8 226 84.5
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 1.5e-100 369.8 219 85.4
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.0e-100 369.4 225 83.6
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 2.6e-100 369.0 224 83.0
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 4.4e-100 368.2 218 85.3
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.3e-99 366.7 226 83.6
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.4e-98 363.2 219 82.6
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.9e-98 362.8 219 83.6
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 9.3e-98 360.5 219 84.0
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 2.1e-97 359.4 217 82.0
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.1e-97 359.4 217 83.9
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.6e-97 358.2 221 80.5
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 6.0e-97 357.8 207 87.4
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.7e-96 356.3 225 78.7
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 3.0e-96 355.5 219 79.9
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 5.1e-96 354.8 214 81.8
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 5.1e-96 354.8 218 81.7
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 6.6e-96 354.4 216 80.6
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 6.6e-96 354.4 219 82.6
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 6.6e-96 354.4 210 84.3
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.1e-95 353.6 247 74.9
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.1e-95 353.6 247 74.9
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.5e-95 353.2 219 82.2
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.5e-95 353.2 207 83.6
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.9e-95 352.8 219 81.3
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.3e-95 352.1 219 78.1
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 4.3e-95 351.7 207 84.1
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 5.6e-95 351.3 218 80.3
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 7.3e-95 350.9 218 82.6
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 9.6e-95 350.5 213 81.7
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 9.6e-95 350.5 219 79.0
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 2.1e-94 349.4 207 82.6
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 3.6e-94 348.6 219 82.2
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 4.8e-94 348.2 219 80.4
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.2e-94 347.8 219 80.4
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 8.1e-94 347.4 207 81.6
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 8.1e-94 347.4 214 80.8
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.1e-93 347.1 211 81.5
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.4e-93 345.9 216 78.2
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.3e-93 344.7 225 77.8
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.3e-93 344.7 225 77.8
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 6.9e-93 344.4 215 80.9
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 1.5e-92 343.2 223 77.1
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.5e-92 343.2 226 75.2
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.5e-92 343.2 226 75.2
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.6e-92 342.4 228 76.3
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 4.4e-92 341.7 225 76.9
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 5.8e-92 341.3 208 82.7
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 7.6e-92 340.9 219 79.9
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.3e-91 340.1 206 81.6
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.3e-91 340.1 223 80.3
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.7e-91 339.7 224 76.8
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 3.8e-91 338.6 210 80.0
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 6.4e-91 337.8 207 82.1
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 6.4e-91 337.8 207 82.1
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 6.4e-91 337.8 216 79.6
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 8.4e-91 337.4 204 82.8
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 8.4e-91 337.4 220 75.5
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.9e-90 336.3 219 77.6
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.9e-90 336.3 219 76.3
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 5.4e-90 334.7 215 79.1
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 5.4e-90 334.7 208 80.8
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 7.1e-90 334.3 218 77.5
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.2e-89 333.6 225 73.3
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 2.1e-89 332.8 207 80.2
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 4.6e-89 331.6 216 77.3
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 7.8e-89 330.9 240 71.2
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.3e-88 330.1 196 85.2
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 3.9e-88 328.6 216 76.4
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.1e-87 327.0 207 78.7
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.5e-87 326.6 207 78.3
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 2.5e-87 325.9 207 79.2
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 4.3e-87 325.1 227 74.9
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.3e-86 323.6 233 73.0
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.6e-86 323.2 219 78.5
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.6e-86 323.2 206 80.1
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.8e-85 319.7 207 77.8
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 9.0e-85 317.4 192 82.3
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 8.4e-83 310.8 219 74.4
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.1e-82 310.5 201 78.1
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 6.0e-81 304.7 183 81.4
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 2.4e-77 292.7 207 69.6
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 9.0e-77 290.8 197 77.7
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.5e-76 290.0 170 88.2
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.5e-76 290.0 206 68.9
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 3.4e-76 288.9 214 69.6
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 6.5e-75 284.6 207 69.1
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 7.1e-74 281.2 173 82.7
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 9.3e-74 280.8 207 68.6
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.1e-71 273.9 219 68.5
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 5.7e-71 271.6 202 72.8
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 2.1e-70 269.6 173 80.9
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.4e-69 266.9 222 66.7
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 7.6e-68 261.2 223 64.1
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.0e-67 260.8 154 88.3
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 2.6e-60 236.1 140 83.6
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.9e-58 229.9 139 86.3
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.0e-56 224.2 138 84.1
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.9e-50 203.4 183 62.8
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 5.7e-47 191.8 113 83.2
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 3.7e-46 189.1 120 80.0
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 9.1e-45 184.5 134 71.6
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 4.8e-38 162.2 108 76.9
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 4.8e-38 162.2 137 66.4
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.3e-35 154.1 115 70.4
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 1.8e-32 143.7 204 37.7
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 2.0e-31 140.2 211 40.8
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 7.5e-31 138.3 97 70.1
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.8e-29 133.7 197 38.1
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 3.6e-25 119.4 101 65.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 6.1e-25 118.6 101 64.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 6.3e-22 108.6 81 71.6
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 6.6e-19 98.6 113 52.2
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.1e-18 97.8 57 75.4
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 4.3e-18 95.9 78 52.6


User provided reference genes

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