Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G019900 Manihot esculenta HOM05D007828 ORTHO05D009889 4.4e-134 481.5 275 100.0
Manes.16G116600 Manihot esculenta HOM05D007828 ORTHO05D009889 1.2e-75 287.3 289 66.1
CiPaw.04G164600 Carya illinoinensis HOM05D007828 ORTHO05D009889 8.4e-69 264.6 288 59.0
Potri.018G079400 Populus trichocarpa HOM05D007828 ORTHO05D009889 1.9e-68 263.5 297 63.3
Thecc.09G111200 Theobroma cacao HOM05D007828 ORTHO05D009889 5.6e-65 251.9 305 55.4
Ciclev10010509m.g Citrus clementina HOM05D007828 ORTHO05D009889 4.4e-62 242.3 293 57.7
Cfa003261 Carpinus fangiana HOM05D007828 ORTHO05D009889 3.0e-58 229.6 282 60.6
Haze_25710 Corylus avellana HOM05D007828 ORTHO05D009889 1.3e-56 224.2 287 59.9
Prupe.7G230300 Prunus persica HOM05D007828 ORTHO05D009889 6.2e-56 221.9 310 53.5
CsaV3_1G030510 Cucumis sativus L. HOM05D007828 ORTHO05D009889 8.1e-56 221.5 310 52.9
Duzib187G0623 Durio zibethinus HOM05D007828 ORTHO05D009889 4.0e-55 219.2 288 56.6
Cpa.g.sc810.5 Carica papaya HOM05D007828 ORTHO05D009889 9.0e-55 218.0 307 52.8
TWI63G1614 Tripterygium wilfordii HOM05D007828 ORTHO05D009889 1.1e-52 211.1 291 52.2
Atru.chr7.1344 Acer truncatum HOM05D007828 ORTHO05D009889 1.9e-52 210.3 299 55.2
Gohir.A06G062100 Gossypium hirsutum HOM05D007828 ORTHO05D009889 1.0e-50 204.5 292 53.1
Gorai.010G070300 Gossypium raimondii HOM05D007828 ORTHO05D009889 3.9e-50 202.6 292 52.7
Sed0012449 Sechium edule HOM05D007828 ORTHO05D009889 3.3e-49 199.5 297 49.8
Gohir.D06G060400 Gossypium hirsutum HOM05D007828 ORTHO05D009889 7.4e-49 198.4 292 50.0
Glyma.08G038800 Glycine max HOM05D007828 ORTHO05D009889 9.6e-49 198.0 284 51.4
Glyma.05G231300 Glycine max HOM05D007828 ORTHO05D009889 4.8e-48 195.7 278 51.4
Sed0011451 Sechium edule HOM05D007828 ORTHO05D009889 6.2e-48 195.3 309 48.9
Lj4g0015011 Lotus japonicus HOM05D007828 ORTHO05D009889 1.2e-46 191.0 292 47.6
FAN19G0878 Fragaria x ananassa HOM05D007828 ORTHO05D009889 5.8e-46 188.7 291 53.3
FvH4_1g04931 Fragaria vesca HOM05D007828 ORTHO05D009889 2.2e-45 186.8 293 53.6
Phvul.002G313500 Phaseolus vulgaris HOM05D007828 ORTHO05D009889 3.8e-45 186.0 295 47.5
FAN26G0421 Fragaria x ananassa HOM05D007828 ORTHO05D009889 1.1e-44 184.5 291 49.8
MD02G1047900 Malus domestica HOM05D007828 ORTHO05D009889 1.1e-44 184.5 312 51.6
RcHm_v2.0_Chr2g0090531 Rosa chinensis HOM05D007828 ORTHO05D009889 1.1e-44 184.5 296 51.0
TAR636G3628 Trochodendron aralioides HOM05D007828 ORTHO05D009889 1.4e-44 184.1 280 51.8
QL02p085484 Quercus lobata HOM05D007828 ORTHO05D009889 7.1e-44 181.8 284 54.9
Actinidia20352 Actinidia chinensis HOM05D007828 ORTHO05D009889 6.0e-43 178.7 281 48.4
Glyma.09G190200 Glycine max HOM05D007828 ORTHO05D009889 1.3e-42 177.6 294 50.3
Cc06_g09610 Coffea canephora HOM05D007828 ORTHO05D009889 3.9e-42 176.0 285 47.4
Duzib168G1738 Durio zibethinus HOM05D007828 ORTHO05D009889 3.9e-42 176.0 224 51.8
MELO3C025334.2 Cucumis melo HOM05D007828 ORTHO05D009889 5.1e-42 175.6 280 49.6
COL.COLO4_34914 Corchorus olitorius HOM05D007828 ORTHO05D009889 6.7e-42 175.3 315 50.8
Dinv41596 Davidia involucrata HOM05D007828 ORTHO05D009889 7.4e-41 171.8 280 52.5
PGR142G3024 Punica granatum HOM05D007828 ORTHO05D009889 2.8e-40 169.9 289 47.8
VMungo0251G2715 Vigna mungo HOM05D007828 ORTHO05D009889 2.8e-40 169.9 297 46.8
TAR624G0153 Trochodendron aralioides HOM05D007828 ORTHO05D009889 1.4e-39 167.5 259 47.9
EL10Ac8g18503 Beta vulgaris HOM05D007828 ORTHO05D009889 7.6e-38 161.8 307 42.3
Medtr6g086505 Medicago truncatula HOM05D007828 ORTHO05D009889 2.2e-37 160.2 298 48.0
Phvul.004G163000 Phaseolus vulgaris HOM05D007828 ORTHO05D009889 6.5e-37 158.7 297 49.8
Ah.14g081900 Amaranthus hybridus HOM05D007828 ORTHO05D009889 2.7e-35 153.3 284 43.7
Actinidia09414 Actinidia chinensis HOM05D007828 ORTHO05D009889 3.5e-35 152.9 259 47.9
THA.LOC104811107 Tarenaya hassleriana HOM05D007828 ORTHO05D009889 1.0e-34 151.4 282 45.0
Psat1g042080 Pisum sativum HOM05D007828 ORTHO05D009889 1.8e-34 150.6 290 48.3
Lj2g0009665 Lotus japonicus HOM05D007828 ORTHO05D009889 3.9e-34 149.4 297 47.8
Lalb_Chr14g0371491 Lupinus albus HOM05D007828 ORTHO05D009889 9.7e-33 144.8 306 45.4
VMungo0464G0263 Vigna mungo HOM05D007828 ORTHO05D009889 4.5e-30 136.0 291 47.1
Oeu013432.1 Olea europaea HOM05D007828 ORTHO05D009889 2.9e-29 133.3 268 41.0
DCAR_028715 Daucus carota HOM05D007828 ORTHO05D009889 1.4e-28 131.0 283 42.4
AUR62021512 Chenopodium quinoa HOM05D007828 ORTHO05D009889 1.2e-27 127.9 265 41.1
Lsat_1_v5_gn_7_40641 Lactuca sativa HOM05D007828 ORTHO05D009889 6.3e-24 115.5 280 41.1
PSO063G6099 Papaver somniferum HOM05D007828 ORTHO05D009889 1.4e-23 114.4 320 36.9
Rhsim03G0242900 Rhododendron simsii HOM05D007828 ORTHO05D009889 2.4e-23 113.6 296 38.2
PSO782G3184 Papaver somniferum HOM05D007828 ORTHO05D009889 4.1e-23 112.8 291 39.2
Lsat_1_v5_gn_5_103381 Lactuca sativa HOM05D007828 ORTHO05D009889 5.3e-23 112.5 283 41.0
Dinv36622 Davidia involucrata HOM05D007828 ORTHO05D009889 2.5e-20 103.6 251 43.8
Sp2g17900 Schrenkiella parvula HOM05D007828 ORTHO05D009889 3.2e-20 103.2 288 39.6
Ah.09g227940 Amaranthus hybridus HOM05D007828 ORTHO05D009889 6.1e-19 99.0 217 36.4
MBI15_g13431_MAGBIO Magnolia biondii HOM05D007828 ORTHO05D009889 1.0e-18 98.2 264 36.4
TPR.G35269 Trifolium pratense HOM05D007828 ORTHO05D009889 9.7e-17 91.7 213 40.8
Lj7C649T8 Lonicera japonica HOM05D007828 ORTHO05D009889 1.7e-16 90.9 154 44.2
A06p39980 Brassica napus HOM05D007828 ORTHO05D009889 4.8e-16 89.4 287 35.5
BraA06t26913Z Brassica rapa HOM05D007828 ORTHO05D009889 4.8e-16 89.4 287 35.5
Lalb_Chr22g0352821 Lupinus albus HOM05D007828 ORTHO05D009889 1.8e-15 87.4 281 39.9
BcaC06g33685 Brassica carinata HOM05D007828 ORTHO05D009889 1.6e-14 84.3 280 36.4
CARHR154000 Cardamine hirsuta HOM05D007828 ORTHO05D009889 1.6e-14 84.3 282 34.0
ECA240G1757 Erigeron canadensis HOM05D007828 ORTHO05D009889 1.6e-14 84.3 207 34.3
PGSC0003DMG400000314 Solanum tuberosum HOM05D007828 ORTHO05D009889 2.6e-14 83.6 113 53.1
C07p38190 Brassica napus HOM05D007828 ORTHO05D009889 5.9e-14 82.4 285 35.4
BolC7t44341H Brassica oleracea HOM05D007828 ORTHO05D009889 5.9e-14 82.4 285 35.4
AT3G29300 Arabidopsis thaliana HOM05D007828 ORTHO05D009889 2.9e-13 80.1 289 36.0
Thhalv10004856m.g Eutrema salsugineum HOM05D007828 ORTHO05D009889 3.8e-13 79.7 290 34.8
Gorai.001G005100 Gossypium raimondii HOM05D007828 ORTHO05D009889 1.5e-12 77.8 188 43.1
Gohir.A07G006450 Gossypium hirsutum HOM05D007828 ORTHO05D009889 1.6e-11 74.3 195 40.5
Glyma.07G086700 Glycine max HOM05D007828 ORTHO05D009889 1.0e-10 71.6 182 44.0
AL5G19330 Arabidopsis lyrata HOM05D007828 ORTHO05D009889 5.2e-10 69.3 290 36.6
HanXRQChr03g0061871 Helianthus annuus HOM05D007828 ORTHO05D009889 2.0e-09 67.4 205 39.5
Nn8g39203 Nelumbo nucifera HOM05D007828 ORTHO05D009889 3.3e-09 66.6 138 37.0
Sc18g0001180 Simmondsia chinensis HOM05D007828 ORTHO05D009889 9.7e-09 65.1 282 33.3
Carub.0005s0801 Capsella rubella HOM05D007828 ORTHO05D009889 1.7e-08 64.3 267 34.8


User provided reference genes

Program Settings