Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 1.5e-80 302.8 145 100.0
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 2.8e-47 192.2 153 64.1
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 9.0e-38 160.6 150 58.0
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 2.6e-37 159.1 149 58.4
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 3.2e-35 152.1 150 55.3
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 2.1e-34 149.4 149 53.7
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 6.0e-34 147.9 149 49.7
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 6.7e-33 144.4 145 55.9
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 8.7e-33 144.1 151 51.0
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 7.4e-32 141.0 150 52.0
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.6e-31 139.8 149 48.3
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.1e-31 139.4 146 54.8
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 2.1e-31 139.4 149 47.7
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 3.1e-30 135.6 151 49.7
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 9.0e-30 134.0 149 45.0
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 1.5e-29 133.3 149 51.0
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 2.0e-29 132.9 146 54.1
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.0e-29 132.9 149 51.0
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 2.6e-29 132.5 151 46.4
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 3.4e-29 132.1 149 50.3
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 4.5e-29 131.7 161 46.0
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 9.9e-29 130.6 149 49.7
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 9.9e-29 130.6 152 47.4
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 1.3e-28 130.2 158 48.1
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 1.7e-28 129.8 151 51.0
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 6.4e-28 127.9 147 46.9
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.9e-27 126.3 159 46.5
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.4e-27 125.9 148 48.0
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 4.2e-27 125.2 149 49.0
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 7.1e-27 124.4 147 48.3
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 7.1e-27 124.4 150 48.0
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 9.3e-27 124.0 114 52.6
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 4.6e-26 121.7 145 48.3
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 7.9e-26 120.9 155 43.2
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.0e-25 120.6 158 46.2
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 2.3e-25 119.4 132 50.0
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 3.0e-25 119.0 146 47.3
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 5.1e-25 118.2 114 56.1
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 6.7e-25 117.9 162 45.1
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 1.1e-24 117.1 149 46.3
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 1.5e-24 116.7 151 47.0
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 2.5e-24 115.9 150 43.3
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 7.4e-24 114.4 146 50.0
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.3e-23 113.6 153 45.1
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 8.2e-23 110.9 154 44.8
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 1.5e-21 106.7 164 43.3
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 2.0e-21 106.3 150 45.3
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 7.6e-21 104.4 130 43.1
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 7.6e-21 104.4 150 42.0
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.0e-20 104.0 148 44.6
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 2.5e-19 99.4 149 42.3
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 3.2e-19 99.0 146 42.5
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 5.5e-19 98.2 143 44.1
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 7.1e-19 97.8 149 38.3
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 9.3e-19 97.4 155 38.7
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 7.9e-18 94.4 163 36.8
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 7.9e-18 94.4 161 36.0
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 1.0e-17 94.0 164 39.6
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 2.3e-17 92.8 153 37.9
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 2.3e-17 92.8 108 49.1
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 8.7e-17 90.9 158 38.0
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 8.7e-17 90.9 157 40.8
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 8.7e-17 90.9 146 41.1
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 3.3e-16 89.0 133 38.3
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 4.3e-16 88.6 157 38.9
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.3e-15 87.0 159 39.0
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.6e-15 86.7 122 40.2
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 4.8e-15 85.1 164 34.8
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 4.8e-15 85.1 127 42.5
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 4.8e-15 85.1 127 42.5
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 1.1e-14 84.0 155 36.1
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 6.9e-14 81.3 124 40.3
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 9.0e-14 80.9 145 36.6
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 9.0e-14 80.9 64 60.9
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 9.0e-14 80.9 155 36.1
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 1.2e-13 80.5 157 36.3
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 2.0e-13 79.7 155 33.5
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 2.0e-13 79.7 121 41.3
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 2.6e-13 79.3 157 36.9
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 2.6e-13 79.3 115 40.0
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 3.4e-13 79.0 125 39.2
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 4.5e-13 78.6 158 36.7
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 4.5e-13 78.6 174 32.2
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 2.9e-12 75.9 113 40.7
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 3.8e-12 75.5 162 35.2
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 3.8e-12 75.5 64 60.9
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 3.8e-12 75.5 64 60.9
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 3.8e-12 75.5 64 60.9
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 5.0e-12 75.1 155 37.4
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 6.5e-12 74.7 70 55.7
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 8.5e-12 74.3 70 55.7
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 8.5e-12 74.3 70 55.7
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.4e-11 73.6 127 36.2
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.5e-11 72.8 124 41.1
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 7.2e-11 71.2 157 35.0
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 1.2e-10 70.5 119 37.8
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 6.1e-10 68.2 149 32.9
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 7.9e-10 67.8 36 77.8
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 5.1e-09 65.1 65 47.7
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.5e-08 62.8 35 77.1
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 5.7e-08 61.6 105 36.2
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 5.7e-08 61.6 105 36.2
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 7.4e-08 61.2 150 32.0


User provided reference genes

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