Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 2.9e-145 518.5 248 100.0
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 1.6e-58 230.3 175 73.1
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 8.7e-41 171.4 176 52.8
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 1.5e-40 170.6 177 53.1
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 3.7e-39 166.0 168 53.0
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 3.7e-39 166.0 177 52.0
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 1.1e-38 164.5 177 51.4
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 2.4e-38 163.3 179 53.6
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 1.5e-37 160.6 176 52.8
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 3.4e-37 159.5 177 52.0
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 7.6e-37 158.3 168 51.8
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.9e-36 156.4 207 46.4
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 1.2e-34 151.0 172 48.8
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 1.2e-34 151.0 168 50.6
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 1.6e-34 150.6 167 51.5
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 2.1e-34 150.2 175 48.6
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 1.0e-33 147.9 176 46.0
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 1.8e-33 147.1 169 45.6
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 3.0e-33 146.4 170 45.3
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 3.9e-33 146.0 170 45.9
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 8.7e-33 144.8 176 44.9
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 2.5e-32 143.3 176 45.5
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 5.6e-32 142.1 173 44.5
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 5.6e-32 142.1 171 49.7
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 5.6e-32 142.1 169 49.1
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 5.6e-32 142.1 173 50.3
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 7.4e-32 141.7 176 45.5
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 1.6e-31 140.6 188 43.6
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.6e-31 140.6 176 44.9
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 3.7e-31 139.4 172 44.8
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 4.8e-31 139.0 172 45.9
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 8.2e-31 138.3 176 43.2
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 8.2e-31 138.3 176 43.2
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 8.2e-31 138.3 176 43.2
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 8.2e-31 138.3 176 43.2
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.1e-30 137.9 174 46.0
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 1.8e-30 137.1 174 43.1
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 4.0e-30 136.0 162 45.7
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 5.3e-30 135.6 174 43.7
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 6.9e-30 135.2 173 46.2
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 3.4e-29 132.9 172 46.5
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 4.5e-29 132.5 172 45.3
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 1.3e-28 131.0 174 45.4
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 1.3e-28 131.0 182 44.5
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 2.2e-28 130.2 181 44.2
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 3.8e-28 129.4 174 46.0
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 3.8e-28 129.4 175 48.6
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 4.9e-28 129.0 182 44.5
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 1.4e-27 127.5 183 43.2
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 1.4e-27 127.5 167 47.3
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 1.4e-27 127.5 167 47.3
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 1.9e-27 127.1 173 43.4
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 3.2e-27 126.3 171 43.9
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 4.2e-27 125.9 178 42.7
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 4.2e-27 125.9 178 42.7
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 7.1e-27 125.2 177 44.6
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 9.3e-27 124.8 182 44.0
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 1.2e-26 124.4 175 43.4
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 1.2e-26 124.4 175 43.4
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 1.2e-26 124.4 178 42.7
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 1.2e-26 124.4 178 42.1
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.6e-26 124.0 166 44.0
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 1.6e-26 124.0 179 41.3
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.6e-26 124.0 176 46.6
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 2.7e-26 123.2 171 42.1
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 4.6e-26 122.5 178 39.3
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 1.0e-25 121.3 168 45.8
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 1.3e-25 120.9 176 43.2
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 2.3e-25 120.2 171 43.3
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 3.9e-25 119.4 177 38.4
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 8.7e-25 118.2 176 39.2
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 8.7e-25 118.2 189 41.8
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 1.9e-24 117.1 177 40.1
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 1.9e-24 117.1 168 41.1
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 2.5e-24 116.7 176 38.6
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 2.5e-24 116.7 176 40.3
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 4.3e-24 115.9 172 43.0
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 5.7e-24 115.5 175 38.3
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.6e-23 114.0 193 43.0
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 1.6e-23 114.0 182 42.3
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.1e-22 111.3 169 42.6
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 1.8e-22 110.5 168 38.7
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 3.1e-22 109.8 185 40.5
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 2.0e-21 107.1 183 39.9
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 2.0e-21 107.1 89 59.6
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 2.6e-21 106.7 165 41.2
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 3.4e-21 106.3 172 37.8
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 3.4e-21 106.3 152 42.1
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 3.4e-21 106.3 89 57.3
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 4.5e-21 105.9 170 41.8
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 7.7e-21 105.1 162 43.8
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 8.5e-20 101.7 178 41.0
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 1.1e-19 101.3 92 53.3
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 2.5e-19 100.1 180 36.7
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 4.2e-19 99.4 97 52.6
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 4.2e-19 99.4 60 76.7
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.6e-18 97.4 183 37.2
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 2.7e-18 96.7 82 59.8
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 3.6e-18 96.3 178 34.8
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 6.1e-18 95.5 164 38.4
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 1.1e-16 91.3 160 33.8
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 2.0e-16 90.5 195 31.3
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 2.0e-16 90.5 195 31.3
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 5.7e-16 89.0 218 30.7
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 1.4e-14 84.3 154 37.7
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 2.4e-14 83.6 150 36.7
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 6.9e-14 82.0 94 48.9
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 2.0e-13 80.5 135 40.0
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 5.9e-13 79.0 62 61.3
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 1.3e-12 77.8 158 31.0
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 8.5e-12 75.1 159 40.9
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 3.2e-11 73.2 99 41.4
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.2e-10 71.2 50 64.0
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 2.7e-10 70.1 84 45.2
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 1.1e-08 64.7 90 38.9
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 1.4e-06 57.8 53 54.7


User provided reference genes

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