Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 2.2e-128 462.6 289 100.0
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 3.2e-79 299.3 262 82.8
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 5.7e-60 235.3 222 75.2
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 1.3e-59 234.2 222 74.3
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 5.3e-58 228.8 216 76.4
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 5.3e-58 228.8 216 75.5
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 2.7e-57 226.5 217 69.1
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 5.9e-57 225.3 216 72.7
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 3.8e-56 222.6 220 73.2
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 1.1e-55 221.1 218 73.4
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 9.4e-55 218.0 216 75.9
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 1.2e-54 217.6 220 73.6
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 2.3e-53 213.4 218 70.2
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 3.0e-53 213.0 219 71.2
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 4.0e-53 212.6 220 71.8
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 1.5e-52 210.7 220 72.3
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 7.5e-52 208.4 221 75.1
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 7.5e-52 208.4 221 75.1
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 7.5e-52 208.4 221 74.2
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 2.2e-51 206.8 221 67.9
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 4.8e-51 205.7 219 72.6
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 8.3e-51 204.9 217 72.4
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 1.1e-50 204.5 253 64.0
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 1.1e-50 204.5 216 72.2
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 2.4e-50 203.4 226 70.8
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 7.0e-50 201.8 224 74.1
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 7.0e-50 201.8 222 68.9
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 2.0e-49 200.3 222 70.7
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 3.5e-49 199.5 221 69.7
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 3.5e-49 199.5 221 69.7
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 3.5e-49 199.5 221 69.7
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 5.9e-49 198.7 226 68.1
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 2.9e-48 196.4 275 59.6
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 5.0e-48 195.7 219 70.8
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 5.0e-48 195.7 222 71.6
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 8.6e-48 194.9 217 71.9
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 1.1e-47 194.5 246 64.2
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 2.5e-47 193.4 224 65.6
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 4.2e-47 192.6 215 66.5
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 4.2e-47 192.6 219 64.8
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 1.6e-46 190.7 223 64.6
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 1.6e-46 190.7 225 62.7
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 1.6e-46 190.7 221 71.0
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 2.8e-46 189.9 222 69.4
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 6.1e-46 188.7 217 65.9
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 6.1e-46 188.7 218 65.1
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 3.0e-45 186.4 225 67.1
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 4.0e-45 186.0 217 67.3
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 5.2e-45 185.7 225 64.9
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 5.2e-45 185.7 217 69.6
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 8.9e-45 184.9 222 67.1
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 1.5e-44 184.1 225 64.4
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 1.5e-44 184.1 222 62.6
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 2.0e-44 183.7 218 66.1
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 4.4e-44 182.6 218 68.3
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 9.8e-44 181.4 225 64.0
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 1.7e-43 180.6 217 71.9
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 3.7e-43 179.5 223 63.2
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 3.7e-43 179.5 221 67.0
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 6.3e-43 178.7 222 62.6
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 8.3e-43 178.3 220 65.9
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 8.3e-43 178.3 211 67.8
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 2.4e-42 176.8 218 68.3
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 3.5e-41 172.9 168 65.5
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 4.5e-41 172.6 222 67.6
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 4.5e-41 172.6 158 77.8
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 1.0e-40 171.4 222 62.2
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 1.0e-40 171.4 222 63.1
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 1.3e-40 171.0 166 75.3
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 5.0e-40 169.1 223 61.4
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 6.6e-40 168.7 172 74.4
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 6.6e-40 168.7 214 67.3
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 8.6e-40 168.3 219 68.0
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.1e-39 167.9 217 63.1
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 1.1e-39 167.9 217 65.0
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 2.5e-39 166.8 171 62.6
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 2.5e-39 166.8 224 51.8
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 8.0e-38 161.8 219 61.6
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.8e-37 160.6 215 57.7
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 1.8e-37 160.6 219 64.8
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 1.5e-36 157.5 143 62.9
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 2.0e-36 157.1 217 64.5
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 3.4e-36 156.4 163 76.1
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 9.2e-34 148.3 233 56.2
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 2.0e-33 147.1 176 63.1
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 1.1e-31 141.4 160 73.1
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 3.3e-31 139.8 129 72.9
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 8.0e-30 135.2 218 61.0
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 7.5e-28 128.6 126 79.4
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 3.2e-26 123.2 157 61.8
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 3.2e-26 123.2 150 70.0
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 7.1e-26 122.1 218 55.5
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 1.0e-24 118.2 224 54.0
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 1.5e-23 114.4 105 79.0
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 1.6e-22 110.9 108 81.5
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 6.2e-22 109.0 168 60.1
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 1.8e-21 107.5 74 78.4
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 6.8e-21 105.5 105 80.0
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 5.8e-20 102.4 88 60.2
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 2.9e-19 100.1 105 81.0
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 1.4e-18 97.8 172 54.1
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.4e-18 97.8 172 55.2
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 5.4e-18 95.9 172 54.7
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.1e-17 94.0 116 47.4
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 6.0e-17 92.4 210 30.5
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 5.6e-15 85.9 157 40.1
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 7.3e-15 85.5 93 52.7
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 1.6e-14 84.3 60 71.7
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 4.7e-14 82.8 141 51.8
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 2.7e-09 67.0 97 44.3
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 6.6e-08 62.4 81 48.1


User provided reference genes

Program Settings