Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G011300 Manihot esculenta HOM05D001921 ORTHO05D001784 1.5e-101 372.9 186 100.0
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 8.8e-54 214.2 185 66.5
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 2.8e-28 129.4 191 48.7
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.4e-27 126.3 194 45.4
Potri.018G022400 Populus trichocarpa HOM05D001921 ORTHO05D001784 7.0e-27 124.8 191 47.6
Gorai.001G036300 Gossypium raimondii HOM05D001921 ORTHO05D001784 3.5e-26 122.5 192 45.3
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.9e-26 121.7 192 45.3
Sabra18G0025100 Salix brachista HOM05D001921 ORTHO05D001784 7.7e-26 121.3 195 46.2
Sabra06G0203000 Salix brachista HOM05D001921 ORTHO05D001784 1.1e-24 117.5 192 45.8
SabraUnG0005100 Salix brachista HOM05D001921 ORTHO05D001784 1.5e-24 117.1 192 45.8
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 4.2e-24 115.5 193 46.1
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 2.1e-23 113.2 195 42.6
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.8e-23 112.8 193 45.6
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 3.6e-23 112.5 194 44.8
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.6e-23 112.5 193 45.6
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 1.0e-22 110.9 190 44.2
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 2.3e-22 109.8 194 41.8
CiPaw.08G008000 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.0e-22 109.4 193 43.5
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 5.2e-22 108.6 193 43.0
Cpa.g.sc127.3 Carica papaya HOM05D001921 ORTHO05D001784 8.9e-22 107.8 186 43.5
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 1.2e-21 107.5 205 45.4
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.2e-20 103.2 197 43.1
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 4.9e-20 102.1 205 42.9
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 4.1e-19 99.0 199 41.2
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 5.4e-19 98.6 185 41.6
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 1.6e-18 97.1 172 42.4
Potri.006G260000 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.7e-18 96.3 188 41.5
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 3.5e-18 95.9 187 40.1
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 1.0e-17 94.4 191 41.4
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 1.3e-17 94.0 223 39.0
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 2.9e-17 92.8 148 46.6
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.1e-16 90.9 188 41.5
Glyma.17G104300 Glycine max HOM05D001921 ORTHO05D001784 1.9e-16 90.1 191 36.1
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 5.6e-16 88.6 189 39.2
THA.LOC104804502 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 9.5e-16 87.8 188 36.2
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 1.6e-15 87.0 189 39.2
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 1.6e-15 87.0 169 39.6
CARHR239920 Cardamine hirsuta HOM05D001921 ORTHO05D001784 2.1e-15 86.7 207 35.3
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 3.6e-15 85.9 195 40.0
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 3.6e-15 85.9 195 40.0
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 8.0e-15 84.7 196 38.3
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 2.3e-14 83.2 181 39.8
Glyma.13G156700 Glycine max HOM05D001921 ORTHO05D001784 2.3e-14 83.2 194 36.1
Aqoxy7G03512 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 5.2e-14 82.0 185 39.5
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 5.2e-14 82.0 141 42.6
MD15G1131400 Malus domestica HOM05D001921 ORTHO05D001784 8.9e-14 81.3 204 36.8
Cfa013095 Carpinus fangiana HOM05D001921 ORTHO05D001784 1.2e-13 80.9 181 39.2
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.2e-13 80.9 116 45.7
C07p59050 Brassica napus HOM05D001921 ORTHO05D001784 2.0e-13 80.1 198 36.4
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 2.0e-13 80.1 116 47.4
CiPaw.16G117000 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.4e-13 79.3 194 36.1
Haze_21453 Corylus avellana HOM05D001921 ORTHO05D001784 4.4e-13 79.0 164 39.0
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 4.4e-13 79.0 198 32.3
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 5.8e-13 78.6 199 37.7
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 7.5e-13 78.2 156 39.1
TAR625G0682 Trochodendron aralioides HOM05D001921 ORTHO05D001784 9.8e-13 77.8 175 36.6
A03p61190 Brassica napus HOM05D001921 ORTHO05D001784 1.3e-12 77.4 197 34.0
Carub.0007s0853 Capsella rubella HOM05D001921 ORTHO05D001784 1.3e-12 77.4 214 33.6
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.3e-12 77.4 160 36.9
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 1.3e-12 77.4 158 39.2
Prupe.1G486800 Prunus persica HOM05D001921 ORTHO05D001784 1.3e-12 77.4 191 36.1
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 2.2e-12 76.6 186 35.5
Prupe.1G486700 Prunus persica HOM05D001921 ORTHO05D001784 2.2e-12 76.6 193 37.8
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 3.7e-12 75.9 198 39.4
Peaxi162Scf00116g00043 Petunia axillaris HOM05D001921 ORTHO05D001784 4.9e-12 75.5 132 35.6
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 4.9e-12 75.5 131 38.2
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 6.4e-12 75.1 199 35.2
THA.LOC104803850 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 6.4e-12 75.1 113 42.5
Lsat_1_v5_gn_6_115320 Lactuca sativa HOM05D001921 ORTHO05D001784 8.3e-12 74.7 242 32.6
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 8.3e-12 74.7 172 39.0
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 8.3e-12 74.7 131 38.2
Duzib187G0406 Durio zibethinus HOM05D001921 ORTHO05D001784 1.1e-11 74.3 174 39.1
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 1.1e-11 74.3 175 37.7
TAR625G1323 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.4e-11 73.9 175 36.0
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 1.9e-11 73.6 210 35.2
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.9e-11 73.6 201 34.8
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.9e-11 73.6 197 35.5
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 1.9e-11 73.6 164 39.6
Sc14g0000060 Simmondsia chinensis HOM05D001921 ORTHO05D001784 1.9e-11 73.6 160 36.2
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 2.4e-11 73.2 201 34.8
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 2.4e-11 73.2 166 39.8
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 3.2e-11 72.8 199 34.7
Sp7g29820 Schrenkiella parvula HOM05D001921 ORTHO05D001784 3.2e-11 72.8 206 32.5
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 4.1e-11 72.4 152 37.5
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 4.1e-11 72.4 187 34.8
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 5.4e-11 72.0 173 39.3
Medtr4g116830 Medicago truncatula HOM05D001921 ORTHO05D001784 9.2e-11 71.2 196 33.2
COL.COLO4_18732 Corchorus olitorius HOM05D001921 ORTHO05D001784 1.2e-10 70.9 167 35.9
Sed0017709 Sechium edule HOM05D001921 ORTHO05D001784 1.2e-10 70.9 171 39.2
Actinidia23087 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.6e-10 70.5 94 44.7
Ca_21607_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 1.6e-10 70.5 208 31.7
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.6e-10 70.5 144 38.2
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 2.0e-10 70.1 190 33.7
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 2.0e-10 70.1 201 35.8
Actinidia38704 Actinidia chinensis HOM05D001921 ORTHO05D001784 2.7e-10 69.7 152 40.8
AT2G25250 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 2.7e-10 69.7 186 32.8
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 2.7e-10 69.7 208 35.6
Thecc.09G037400 Theobroma cacao HOM05D001921 ORTHO05D001784 2.7e-10 69.7 173 37.0
Lalb_Chr08g0244291 Lupinus albus HOM05D001921 ORTHO05D001784 7.8e-10 68.2 184 37.5
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 7.8e-10 68.2 191 33.0
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 7.8e-10 68.2 150 38.0
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.0e-09 67.8 198 32.3
Ca_03892_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 1.3e-09 67.4 164 32.9
Eucgr.C02723 Eucalyptus grandis HOM05D001921 ORTHO05D001784 1.7e-09 67.0 197 33.0
Gorai.010G110500 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.7e-09 67.0 113 41.6
A01p06280 Brassica napus HOM05D001921 ORTHO05D001784 2.3e-09 66.6 210 30.5
Gohir.D06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.3e-09 66.6 116 41.4
MELO3C004451.2 Cucumis melo HOM05D001921 ORTHO05D001784 3.0e-09 66.2 212 34.0
Lj4g0015946 Lotus japonicus HOM05D001921 ORTHO05D001784 3.9e-09 65.9 146 38.4
AL7G19870 Arabidopsis lyrata HOM05D001921 ORTHO05D001784 5.0e-09 65.5 202 33.2
ECA246G3871 Erigeron canadensis HOM05D001921 ORTHO05D001784 5.0e-09 65.5 273 28.9
Gohir.A06G095800 Gossypium hirsutum HOM05D001921 ORTHO05D001784 6.6e-09 65.1 124 40.3
Glyma.04G063200 Glycine max HOM05D001921 ORTHO05D001784 8.6e-09 64.7 189 34.4
Medtr2g461300 Medicago truncatula HOM05D001921 ORTHO05D001784 1.1e-08 64.3 134 38.8
PGSC0003DMG400029898 Solanum tuberosum HOM05D001921 ORTHO05D001784 1.1e-08 64.3 184 32.6
Psat1g022640 Pisum sativum HOM05D001921 ORTHO05D001784 1.9e-08 63.5 132 39.4
CsaV3_2G003470 Cucumis sativus L. HOM05D001921 ORTHO05D001784 2.5e-08 63.2 161 36.0
AT4G32020 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 4.3e-08 62.4 200 32.5
Gohir.A06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.3e-08 62.4 138 40.6
Gohir.D06G096000 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.3e-08 62.4 153 34.6
DCAR_014829 Daucus carota HOM05D001921 ORTHO05D001784 7.3e-08 61.6 181 36.5
Gorai.010G110700 Gossypium raimondii HOM05D001921 ORTHO05D001784 7.3e-08 61.6 153 34.0
Oeu030377.1 Olea europaea HOM05D001921 ORTHO05D001784 1.2e-07 60.8 193 34.7
PGR102G2943 Punica granatum HOM05D001921 ORTHO05D001784 1.2e-07 60.8 150 33.3
C01p06910 Brassica napus HOM05D001921 ORTHO05D001784 1.6e-07 60.5 225 28.4
Lj6g0003156 Lotus japonicus HOM05D001921 ORTHO05D001784 1.6e-07 60.5 189 29.1
Lj6g0019677 Lotus japonicus HOM05D001921 ORTHO05D001784 1.6e-07 60.5 189 29.1
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 2.1e-07 60.1 155 35.5
Glyma.06G064500 Glycine max HOM05D001921 ORTHO05D001784 2.1e-07 60.1 185 34.1
Phvul.009G089600 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 2.8e-07 59.7 192 32.3
VMungo1309G2915 Vigna mungo HOM05D001921 ORTHO05D001784 2.8e-07 59.7 185 33.0
Lalb_Chr11g0072831 Lupinus albus HOM05D001921 ORTHO05D001784 3.6e-07 59.3 125 41.6
CiPaw.02G088800 Carya illinoinensis HOM05D001921 ORTHO05D001784 4.7e-07 58.9 162 29.6
Hma1.2p1_0643F.1_g194540 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 4.7e-07 58.9 153 32.7
CDE11G0807 Ceratophyllum demersum HOM05D001921 ORTHO05D001784 6.2e-07 58.5 190 30.5
Lj6g0019201 Lotus japonicus HOM05D001921 ORTHO05D001784 6.2e-07 58.5 93 33.3
BolC1t00688H Brassica oleracea HOM05D001921 ORTHO05D001784 8.0e-07 58.2 218 28.9
BraA01t00594Z Brassica rapa HOM05D001921 ORTHO05D001784 8.0e-07 58.2 225 28.0
CsaV3_6G005540 Cucumis sativus L. HOM05D001921 ORTHO05D001784 8.0e-07 58.2 153 33.3
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 8.0e-07 58.2 145 31.7
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 1.1e-06 57.8 180 31.1
ClCG06G005610 Citrullus lanatus HOM05D001921 ORTHO05D001784 1.8e-06 57.0 154 31.8
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.8e-06 57.0 191 29.8
Haze_21461 Corylus avellana HOM05D001921 ORTHO05D001784 2.3e-06 56.6 146 34.2
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 2.3e-06 56.6 185 30.3
CANSAT25G3188 Cannabis sativa HOM05D001921 ORTHO05D001784 3.1e-06 56.2 168 35.1
Haze_21460 Corylus avellana HOM05D001921 ORTHO05D001784 3.1e-06 56.2 146 34.2
Sed0007577 Sechium edule HOM05D001921 ORTHO05D001784 3.1e-06 56.2 201 28.9
BcaC09g51990 Brassica carinata HOM05D001921 ORTHO05D001784 4.0e-06 55.8 225 27.6
Thhalv10029029m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 4.0e-06 55.8 127 36.2
Duzib212G0985 Durio zibethinus HOM05D001921 ORTHO05D001784 5.2e-06 55.5 145 34.5
Glyma.13G212500 Glycine max HOM05D001921 ORTHO05D001784 8.9e-06 54.7 190 31.1
Medtr2g020830 Medicago truncatula HOM05D001921 ORTHO05D001784 8.9e-06 54.7 148 32.4
Sp6g01920 Schrenkiella parvula HOM05D001921 ORTHO05D001784 8.9e-06 54.7 141 36.9


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